RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 LRRC4CQ9HCJ2 640 aa6.84□□□□□ -1.31
KTN1-223ENST00000555573 ATG3Q9NT62 314 aa6.84□□□□□ -1.31
KTN1-223ENST00000555573 PRR13Q9NZ81 148 aa6.84□□□□□ -1.31
KTN1-223ENST00000555573 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.84□□□□□ -1.31
KTN1-223ENST00000555573 FAM155AB1AL88 458 aaPredicted RBP6.83□□□□□ -1.32
KTN1-223ENST00000555573 KCNH1O95259 989 aa6.83□□□□□ -1.32
KTN1-223ENST00000555573 CAPNS1P04632 268 aa6.83□□□□□ -1.32
KTN1-223ENST00000555573 HSP90AA2PQ14568 343 aaPredicted RBP6.83□□□□□ -1.32
KTN1-223ENST00000555573 NKPD1Q17RQ9 610 aa6.83□□□□□ -1.32
KTN1-223ENST00000555573 RSPO4Q2I0M5 234 aaPredicted RBP6.83□□□□□ -1.32
KTN1-223ENST00000555573 TMEM67Q5HYA8 995 aa6.83□□□□□ -1.32
KTN1-223ENST00000555573 TRIM59Q8IWR1 403 aa6.83□□□□□ -1.32
KTN1-223ENST00000555573 ZDHHC15Q96MV8 337 aa6.83□□□□□ -1.32
KTN1-223ENST00000555573 SPOCK3Q9BQ16 436 aa6.83□□□□□ -1.32
KTN1-223ENST00000555573 ASCC2Q9H1I8 757 aaPredicted RBP6.83□□□□□ -1.32
KTN1-223ENST00000555573 CHST7Q9NS84 486 aa6.83□□□□□ -1.32
KTN1-223ENST00000555573 DIS3Q9Y2L1 958 aaKnown RBP6.83□□□□□ -1.32
KTN1-223ENST00000555573 TRAV20A0A0B4J274 112 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 GSC2O15499 205 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 L1CAMP32004 1257 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 TKFCQ3LXA3 575 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 CDKAL1Q5VV42 579 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 ARHGAP27Q6ZUM4 889 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 C16orf86Q6ZW13 317 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 BTN2A2Q8WVV5 523 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 EXOC2Q96KP1 924 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 HDAC8Q9BY41 377 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 DUSP15Q9H1R2 295 aaPredicted RBP6.82□□□□□ -1.32
KTN1-223ENST00000555573 ST14Q9Y5Y6 855 aa6.82□□□□□ -1.32
KTN1-223ENST00000555573 H0Y8X5 98 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 ASMTLO95671 621 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 SRFP11831 508 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 CTSKP43235 329 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 FAM209AQ5JX71 171 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 POMZP3Q6PJE2 187 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 SPACA3Q8IXA5 215 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 SLC26A8Q96RN1 970 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 GPR62Q9BZJ7 368 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 PLAGL2Q9UPG8 496 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 ANKRD62A6NC57 917 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 WASH4PA8MWX3 477 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 PPP1R12AO14974 1030 aaPredicted RBP6.81□□□□□ -1.32
KTN1-223ENST00000555573 VAMP4O75379 141 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 CEACAM5P06731 702 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 SF1Q15637 639 aaKnown RBP6.81□□□□□ -1.32
KTN1-223ENST00000555573 CLEC16AQ2KHT3 1053 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 GTF2IRD2BQ6EKJ0 949 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 KIAA0907Q7Z7F0 614 aaPredicted RBP6.81□□□□□ -1.32
KTN1-223ENST00000555573 GTF2IRD2Q86UP8 949 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 ZDHHC13Q8IUH4 622 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 CRACR2BQ8N4Y2 399 aaPredicted RBP6.81□□□□□ -1.32
KTN1-223ENST00000555573 CDC6Q99741 560 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 MKNK2Q9HBH9 465 aa6.81□□□□□ -1.32
KTN1-223ENST00000555573 SF3B6Q9Y3B4 125 aaKnown RBP6.81□□□□□ -1.32
KTN1-223ENST00000555573 PRODHO43272 600 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 CLSTN1O94985 981 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 FGFR1P11362 822 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 PABPC1P11940 636 aaKnown RBP6.8□□□□□ -1.32
KTN1-223ENST00000555573 GRB10Q13322 594 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 ZC3H12BQ5HYM0 836 aaKnown RBP6.8□□□□□ -1.32
KTN1-223ENST00000555573 CRTC3Q6UUV7 619 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 PLD6Q8N2A8 252 aaKnown RBP6.8□□□□□ -1.32
KTN1-223ENST00000555573 DAGLBQ8NCG7 672 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 ENOX1Q8TC92 643 aaKnown RBP6.8□□□□□ -1.32
KTN1-223ENST00000555573 KISS1RQ969F8 398 aaPredicted RBP6.8□□□□□ -1.32
KTN1-223ENST00000555573 OSBP2Q969R2 916 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 HSPA12BQ96MM6 686 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 IER2Q9BTL4 223 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 DHRS4Q9BTZ2 278 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 GPATCH2Q9NW75 528 aa6.8□□□□□ -1.32
KTN1-223ENST00000555573 GPR55Q9Y2T6 319 aaPredicted RBP6.8□□□□□ -1.32
KTN1-223ENST00000555573 TRBV23-1A0A0A0MS06 115 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 H3BS24 57 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 MSTNO14793 375 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 DYRK3O43781 588 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 CPSF6Q16630 551 aaKnown RBP eCLIP6.79□□□□□ -1.32
KTN1-223ENST00000555573 TCTN2Q96GX1 697 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 FEZ1Q99689 392 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 NKX2-4Q9H2Z4 354 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 MRPS23Q9Y3D9 190 aaKnown RBP6.79□□□□□ -1.32
KTN1-223ENST00000555573 CD2APQ9Y5K6 639 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 PRR19A6NJB7 356 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 CYP26A1O43174 497 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 GSNP06396 782 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 TCEA2Q15560 299 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 DPY19L1Q2PZI1 675 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 NSMFQ6X4W1 530 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 TSPYL5Q86VY4 417 aaPredicted RBP6.79□□□□□ -1.32
KTN1-223ENST00000555573 ZNF655Q8N720 491 aaPredicted RBP6.79□□□□□ -1.32
KTN1-223ENST00000555573 MCMBPQ9BTE3 642 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 TRIT1Q9H3H1 467 aaKnown RBP6.79□□□□□ -1.32
KTN1-223ENST00000555573 PIM2Q9P1W9 311 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 ZSWIM5Q9P217 1185 aa6.79□□□□□ -1.32
KTN1-223ENST00000555573 DLX3O60479 287 aa6.78□□□□□ -1.32
KTN1-223ENST00000555573 GYS2P54840 703 aa6.78□□□□□ -1.32
KTN1-223ENST00000555573 AMPD2Q01433 879 aa6.78□□□□□ -1.32
KTN1-223ENST00000555573 CBX2Q14781 532 aaPredicted RBP6.78□□□□□ -1.32
KTN1-223ENST00000555573 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
KTN1-223ENST00000555573 CWF19L1Q69YN2 538 aaKnown RBP6.78□□□□□ -1.32
KTN1-223ENST00000555573 SCUBE1Q8IWY4 988 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms