RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 HHIPL1Q96JK4 782 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 BDH2Q9BUT1 245 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 PCDHA5Q9Y5H7 936 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 MINDY4BA8MYZ0 360 aa6.92□□□□□ -1.3
SNX6-204ENST00000555541 FFAR3O14843 346 aa6.92□□□□□ -1.3
SNX6-204ENST00000555541 XPCQ01831 940 aaPredicted RBP6.92□□□□□ -1.3
SNX6-204ENST00000555541 PLP2Q04941 152 aa6.92□□□□□ -1.3
SNX6-204ENST00000555541 PUM1Q14671 1186 aaKnown RBP eCLIP6.92□□□□□ -1.3
SNX6-204ENST00000555541 FBXL19Q6PCT2 694 aa6.92□□□□□ -1.3
SNX6-204ENST00000555541 RNF111Q6ZNA4 994 aa6.92□□□□□ -1.3
SNX6-204ENST00000555541 FAM196AQ6ZSG2 479 aa6.92□□□□□ -1.3
SNX6-204ENST00000555541 CNOT11Q9UKZ1 510 aaKnown RBP6.92□□□□□ -1.3
SNX6-204ENST00000555541 AKAP8O43823 692 aaKnown RBP6.91□□□□□ -1.3
SNX6-204ENST00000555541 GREM1O60565 184 aa6.91□□□□□ -1.3
SNX6-204ENST00000555541 CEBPAP49715 358 aaPredicted RBP6.91□□□□□ -1.3
SNX6-204ENST00000555541 NMIQ13287 307 aaPredicted RBP6.91□□□□□ -1.3
SNX6-204ENST00000555541 NBPF9Q3BBW0 867 aa6.91□□□□□ -1.3
SNX6-204ENST00000555541 NBPF12Q5TAG4 269 aaPredicted RBP6.91□□□□□ -1.3
SNX6-204ENST00000555541 ERMP1Q7Z2K6 904 aa6.91□□□□□ -1.3
SNX6-204ENST00000555541 PHACTR4Q8IZ21 702 aa6.91□□□□□ -1.3
SNX6-204ENST00000555541 DAGLBQ8NCG7 672 aa6.91□□□□□ -1.3
SNX6-204ENST00000555541 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
SNX6-204ENST00000555541 COPRSQ9NQ92 184 aa6.91□□□□□ -1.3
SNX6-204ENST00000555541 SORBS3O60504 671 aa6.9□□□□□ -1.3
SNX6-204ENST00000555541 ATE1O95260 518 aa6.9□□□□□ -1.3
SNX6-204ENST00000555541 SNW1Q13573 536 aaKnown RBP6.9□□□□□ -1.3
SNX6-204ENST00000555541 ZPBP2Q6X784 338 aa6.9□□□□□ -1.3
SNX6-204ENST00000555541 TMC3Q7Z5M5 1100 aa6.9□□□□□ -1.3
SNX6-204ENST00000555541 TCTN2Q96GX1 697 aa6.9□□□□□ -1.3
SNX6-204ENST00000555541 PWWP2AQ96N64 755 aa6.9□□□□□ -1.3
SNX6-204ENST00000555541 FOXP3Q9BZS1 431 aa6.9□□□□□ -1.3
SNX6-204ENST00000555541 TNFRSF1AP19438 455 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 IGFBP6P24592 240 aaPredicted RBP6.89□□□□□ -1.31
SNX6-204ENST00000555541 GBP1P32455 592 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 KRTAP1-1Q07627 177 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 KIR3DS1Q14943 382 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 CLEC16AQ2KHT3 1053 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 BBS9Q3SYG4 887 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 ARSHQ5FYA8 562 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 CEP128Q6ZU80 1094 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 LINC00116Q8NCU8 138 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 BRMS1Q9HCU9 246 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 KBTBD4Q9NVX7 518 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 IRS2Q9Y4H2 1338 aa6.89□□□□□ -1.31
SNX6-204ENST00000555541 ABLIM1O14639 778 aa6.88□□□□□ -1.31
SNX6-204ENST00000555541 TLR3O15455 904 aaKnown RBP6.88□□□□□ -1.31
SNX6-204ENST00000555541 RPL10P27635 214 aaKnown RBP6.88□□□□□ -1.31
SNX6-204ENST00000555541 PWP1Q13610 501 aa6.88□□□□□ -1.31
SNX6-204ENST00000555541 CDCP2Q5VXM1 449 aa6.88□□□□□ -1.31
SNX6-204ENST00000555541 ZNF655Q8N720 491 aaPredicted RBP6.88□□□□□ -1.31
SNX6-204ENST00000555541 ROBO2Q9HCK4 1378 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 POLR2BP30876 1174 aaKnown RBP6.87□□□□□ -1.31
SNX6-204ENST00000555541 CRKP46108 304 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 SLURP1P55000 103 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 CBX2Q14781 532 aaPredicted RBP6.87□□□□□ -1.31
SNX6-204ENST00000555541 DIEXFQ68CQ4 756 aaKnown RBP6.87□□□□□ -1.31
SNX6-204ENST00000555541 WAPLQ7Z5K2 1190 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 CNNM2Q9H8M5 875 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 EHMT1Q9H9B1 1298 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 TCFL5Q9UL49 500 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 MINPP1Q9UNW1 487 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 PCDHB14Q9Y5E9 798 aa6.87□□□□□ -1.31
SNX6-204ENST00000555541 FADS2P1A8MWK0 482 aa6.86□□□□□ -1.31
SNX6-204ENST00000555541 SLC14A2Q15849 920 aa6.86□□□□□ -1.31
SNX6-204ENST00000555541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.86□□□□□ -1.31
SNX6-204ENST00000555541 GMIPQ9P107 970 aa6.86□□□□□ -1.31
SNX6-204ENST00000555541 SUV39H1O43463 412 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 PRAMEF1O95521 474 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 RNF4P78317 190 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 OLFML2BQ68BL8 750 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 OVOS1Q6IE37 1185 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 TMC6Q7Z403 805 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 ATG4CQ96DT6 458 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 PRDM14Q9GZV8 571 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 TNFRSF12AQ9NP84 129 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 VTI1BQ9UEU0 232 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 ZMYM5Q9UJ78 669 aa6.85□□□□□ -1.31
SNX6-204ENST00000555541 RAG1P15918 1043 aa6.84□□□□□ -1.31
SNX6-204ENST00000555541 EIF4A3P38919 411 aaKnown RBP6.84□□□□□ -1.31
SNX6-204ENST00000555541 KCNC1P48547 511 aa6.84□□□□□ -1.31
SNX6-204ENST00000555541 NCKAP1LP55160 1127 aa6.84□□□□□ -1.31
SNX6-204ENST00000555541 CLCQ05315 142 aa6.84□□□□□ -1.31
SNX6-204ENST00000555541 HSF5Q4G112 596 aaPredicted RBP6.84□□□□□ -1.31
SNX6-204ENST00000555541 AEBP1Q8IUX7 1158 aa6.84□□□□□ -1.31
SNX6-204ENST00000555541 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
SNX6-204ENST00000555541 ASCC2Q9H1I8 757 aaPredicted RBP6.84□□□□□ -1.31
SNX6-204ENST00000555541 MATN3O15232 486 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 SIGLEC6O43699 453 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 BUB1BO60566 1050 aaPredicted RBP6.83□□□□□ -1.32
SNX6-204ENST00000555541 MPOP05164 745 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 SYPP08247 313 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 FBLN1P23142 703 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 PCBP3P57721 371 aaKnown RBP6.83□□□□□ -1.32
SNX6-204ENST00000555541 RTP1P59025 263 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 ZXDAP98168 799 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 CWF19L2Q2TBE0 894 aaKnown RBP6.83□□□□□ -1.32
SNX6-204ENST00000555541 TMEM192Q8IY95 271 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 ZNF296Q8WUU4 475 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms