RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 SSRP1Q08945 709 aaKnown RBP6.35□□□□□ -1.39
KTN1-222ENST00000555506 HOMER1Q86YM7 354 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 MFSD4AQ8N468 514 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 CYB5D2Q8WUJ1 264 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 APPBP2Q92624 585 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 SLC6A18Q96N87 628 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 EPN3Q9H201 632 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 FANCLQ9NW38 375 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 TMEM260Q9NX78 707 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 SUCOQ9UBS9 1254 aaKnown RBP6.35□□□□□ -1.39
KTN1-222ENST00000555506 CAPN6Q9Y6Q1 641 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 PITPNM2Q9BZ72 1349 aa6.35□□□□□ -1.39
KTN1-222ENST00000555506 ESYT3A0FGR9 886 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 SUSD5O60279 629 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 FUT4P22083 530 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 GBP1P32455 592 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 CLCN7P51798 805 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 PLCL1Q15111 1095 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 TMEM192Q8IY95 271 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 HSPA12BQ96MM6 686 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 ADAMTS6Q9UKP5 1117 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 CEP131Q9UPN4 1083 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 ST14Q9Y5Y6 855 aa6.34□□□□□ -1.39
KTN1-222ENST00000555506 FAM155AB1AL88 458 aaPredicted RBP6.34□□□□□ -1.4
KTN1-222ENST00000555506 PPM1GO15355 546 aaPredicted RBP6.34□□□□□ -1.4
KTN1-222ENST00000555506 CLEC3AO75596 197 aa6.34□□□□□ -1.4
KTN1-222ENST00000555506 SQSTM1Q13501 440 aa6.34□□□□□ -1.4
KTN1-222ENST00000555506 SLC10A6Q3KNW5 377 aa6.34□□□□□ -1.4
KTN1-222ENST00000555506 CDKAL1Q5VV42 579 aa6.34□□□□□ -1.4
KTN1-222ENST00000555506 BAHD1Q8TBE0 780 aaPredicted RBP6.34□□□□□ -1.4
KTN1-222ENST00000555506 ASB11Q8WXH4 323 aa6.34□□□□□ -1.4
KTN1-222ENST00000555506 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.34□□□□□ -1.4
KTN1-222ENST00000555506 SEMA3GQ9NS98 782 aa6.34□□□□□ -1.4
KTN1-222ENST00000555506 H3BS24 57 aa6.33□□□□□ -1.4
KTN1-222ENST00000555506 CYP7A1P22680 504 aa6.33□□□□□ -1.4
KTN1-222ENST00000555506 ZNF143P52747 638 aaPredicted RBP6.33□□□□□ -1.4
KTN1-222ENST00000555506 TNK2Q07912 1038 aa6.33□□□□□ -1.4
KTN1-222ENST00000555506 ZNF792Q3KQV3 632 aa6.33□□□□□ -1.4
KTN1-222ENST00000555506 LILRA6Q6PI73 481 aa6.33□□□□□ -1.4
KTN1-222ENST00000555506 PPFIBP1Q86W92 1011 aa6.33□□□□□ -1.4
KTN1-222ENST00000555506 SMARCC1Q92922 1105 aaPredicted RBP6.33□□□□□ -1.4
KTN1-222ENST00000555506 Q96M66 194 aa6.33□□□□□ -1.4
KTN1-222ENST00000555506 SPATA9Q9BWV2 254 aa6.33□□□□□ -1.4
KTN1-222ENST00000555506 IQCA1LA6NCM1 817 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 B8ZZF3 427 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 RNASE1P07998 156 aaKnown RBP6.32□□□□□ -1.4
KTN1-222ENST00000555506 ITGB5P18084 799 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 ETV3P41162 512 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 KIR3DL1P43629 444 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 IKZF1Q13422 519 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 ZNF648Q5T619 568 aaPredicted RBP6.32□□□□□ -1.4
KTN1-222ENST00000555506 ANGEL2Q5VTE6 544 aaKnown RBP6.32□□□□□ -1.4
KTN1-222ENST00000555506 C16orf86Q6ZW13 317 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 ANKRD13AQ8IZ07 590 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 LRRC47Q8N1G4 583 aaKnown RBP6.32□□□□□ -1.4
KTN1-222ENST00000555506 COX4I2Q96KJ9 171 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 SLKQ9H2G2 1235 aaPredicted RBP6.32□□□□□ -1.4
KTN1-222ENST00000555506 ATP13A1Q9HD20 1204 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 PRDM7Q9NQW5 492 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 PTCH2Q9Y6C5 1203 aa6.32□□□□□ -1.4
KTN1-222ENST00000555506 ANKRD34BA5PLL1 514 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 C9IYK1 514 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 TP53P04637 393 aaPredicted RBP6.31□□□□□ -1.4
KTN1-222ENST00000555506 NAT2P11245 290 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 ZNF124Q15973 351 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 LONRF2Q1L5Z9 754 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 RNF187Q5TA31 235 aaPredicted RBP6.31□□□□□ -1.4
KTN1-222ENST00000555506 TDRD10Q5VZ19 366 aaKnown RBP6.31□□□□□ -1.4
KTN1-222ENST00000555506 KIAA0907Q7Z7F0 614 aaPredicted RBP6.31□□□□□ -1.4
KTN1-222ENST00000555506 ZSWIM2Q8NEG5 633 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 SGSM3Q96HU1 749 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 HAUS7Q99871 368 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 MBNL3Q9NUK0 354 aaKnown RBP6.31□□□□□ -1.4
KTN1-222ENST00000555506 FAM86C1Q9NVL1 165 aa6.31□□□□□ -1.4
KTN1-222ENST00000555506 AGRPO00253 132 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 ADCY3O60266 1144 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 ZP2Q05996 745 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 KRTAP1-1Q07627 177 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 SV2CQ496J9 727 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
KTN1-222ENST00000555506 HEATR6Q6AI08 1181 aaKnown RBP6.3□□□□□ -1.4
KTN1-222ENST00000555506 CCDC144CPQ8IYA2 1237 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 ZBTB38Q8NAP3 1195 aaPredicted RBP6.3□□□□□ -1.4
KTN1-222ENST00000555506 PI4K2BQ8TCG2 481 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 FEZ1Q99689 392 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 CWC22Q9HCG8 908 aaKnown RBP6.3□□□□□ -1.4
KTN1-222ENST00000555506 SUSD2Q9UGT4 822 aa6.3□□□□□ -1.4
KTN1-222ENST00000555506 WASH4PA8MWX3 477 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 LRRN2O75325 713 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 FARP2O94887 1054 aaPredicted RBP6.29□□□□□ -1.4
KTN1-222ENST00000555506 EPHX1P07099 455 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 FAM153BP0C7A2 387 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 ZC3H12BQ5HYM0 836 aaKnown RBP6.29□□□□□ -1.4
KTN1-222ENST00000555506 SYNPOQ8N3V7 929 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 UBE2FQ969M7 185 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 SLC26A8Q96RN1 970 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 APBA2Q99767 749 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 TMX1Q9H3N1 280 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 RC3H2Q9HBD1 1191 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms