RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LINC01356Q8N9X3 169 aa8.43□□□□□ -1.06
VRK1-205ENST00000555402 CCDC74BQ96LY2 380 aa8.43□□□□□ -1.06
VRK1-205ENST00000555402 C8orf37Q96NL8 207 aa8.43□□□□□ -1.06
VRK1-205ENST00000555402 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
VRK1-205ENST00000555402 CHURC1-FNTBB4DL54 471 aa8.42□□□□□ -1.06
VRK1-205ENST00000555402 PLP2Q04941 152 aa8.42□□□□□ -1.06
VRK1-205ENST00000555402 TAF1CQ15572 869 aaPredicted RBP8.42□□□□□ -1.06
VRK1-205ENST00000555402 NAALADL2Q58DX5 795 aa8.42□□□□□ -1.06
VRK1-205ENST00000555402 MEI1Q5TIA1 1274 aa8.42□□□□□ -1.06
VRK1-205ENST00000555402 SYTL5Q8TDW5 730 aaPredicted RBP8.42□□□□□ -1.06
VRK1-205ENST00000555402 VWCEQ96DN2 955 aa8.42□□□□□ -1.06
VRK1-205ENST00000555402 FOXP3Q9BZS1 431 aa8.42□□□□□ -1.06
VRK1-205ENST00000555402 CILPO75339 1184 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 RLBP1P12271 317 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 ERVFRD-1P60508 538 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 NMIQ13287 307 aaPredicted RBP8.41□□□□□ -1.06
VRK1-205ENST00000555402 DIEXFQ68CQ4 756 aaKnown RBP8.41□□□□□ -1.06
VRK1-205ENST00000555402 HS2ST1Q7LGA3 356 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 LDHDQ86WU2 507 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 IGDCC3Q8IVU1 814 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 HHIPL1Q96JK4 782 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 HDAC8Q9BY41 377 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 CCSER2Q9H7U1 834 aa8.41□□□□□ -1.06
VRK1-205ENST00000555402 USP31Q70CQ4 1352 aa8.4□□□□□ -1.06
VRK1-205ENST00000555402 CCDC84Q86UT8 332 aaPredicted RBP8.4□□□□□ -1.06
VRK1-205ENST00000555402 DAGLBQ8NCG7 672 aa8.4□□□□□ -1.06
VRK1-205ENST00000555402 TCTN2Q96GX1 697 aa8.4□□□□□ -1.06
VRK1-205ENST00000555402 PWWP2AQ96N64 755 aa8.4□□□□□ -1.06
VRK1-205ENST00000555402 PLCD4Q9BRC7 762 aa8.4□□□□□ -1.06
VRK1-205ENST00000555402 KLHL14Q9P2G3 628 aa8.4□□□□□ -1.06
VRK1-205ENST00000555402 GGT7Q9UJ14 662 aa8.4□□□□□ -1.06
VRK1-205ENST00000555402 TMEM82A0PJX8 343 aa8.39□□□□□ -1.07
VRK1-205ENST00000555402 MPOP05164 745 aa8.39□□□□□ -1.07
VRK1-205ENST00000555402 RAD51AP2Q09MP3 1159 aa8.39□□□□□ -1.07
VRK1-205ENST00000555402 BNC2Q6ZN30 1099 aaPredicted RBP8.39□□□□□ -1.07
VRK1-205ENST00000555402 TP53I13Q8NBR0 393 aaPredicted RBP8.39□□□□□ -1.07
VRK1-205ENST00000555402 TGIF2Q9GZN2 237 aa8.39□□□□□ -1.07
VRK1-205ENST00000555402 REV1Q9UBZ9 1251 aa8.39□□□□□ -1.07
VRK1-205ENST00000555402 KLHL3Q9UH77 587 aa8.39□□□□□ -1.07
VRK1-205ENST00000555402 TCFL5Q9UL49 500 aa8.39□□□□□ -1.07
VRK1-205ENST00000555402 PRR36Q9H6K5 1346 aa8.38□□□□□ -1.07
VRK1-205ENST00000555402 SSU72P8A0A1W2PR75 194 aa8.38□□□□□ -1.07
VRK1-205ENST00000555402 BPNT1O95861 308 aa8.38□□□□□ -1.07
VRK1-205ENST00000555402 ST13P50502 369 aaKnown RBP8.38□□□□□ -1.07
VRK1-205ENST00000555402 PCBP3P57721 371 aaKnown RBP8.38□□□□□ -1.07
VRK1-205ENST00000555402 RTP1P59025 263 aa8.38□□□□□ -1.07
VRK1-205ENST00000555402 KIF2CQ99661 725 aa8.38□□□□□ -1.07
VRK1-205ENST00000555402 BDH2Q9BUT1 245 aa8.38□□□□□ -1.07
VRK1-205ENST00000555402 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.38□□□□□ -1.07
VRK1-205ENST00000555402 FAM221AA4D161 298 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 INSRRP14616 1297 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 ZNF394Q53GI3 561 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 ZPBP2Q6X784 338 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 USP48Q86UV5 1035 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 PHACTR4Q8IZ21 702 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 ZNF655Q8N720 491 aaPredicted RBP8.37□□□□□ -1.07
VRK1-205ENST00000555402 LINC00116Q8NCU8 138 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 PHC3Q8NDX5 983 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 PPP1R1BQ9UD71 204 aaPredicted RBP8.37□□□□□ -1.07
VRK1-205ENST00000555402 PCDHA5Q9Y5H7 936 aa8.37□□□□□ -1.07
VRK1-205ENST00000555402 GBP1P32455 592 aa8.36□□□□□ -1.07
VRK1-205ENST00000555402 TMC6Q7Z403 805 aa8.36□□□□□ -1.07
VRK1-205ENST00000555402 SREK1Q8WXA9 508 aaKnown RBP8.36□□□□□ -1.07
VRK1-205ENST00000555402 DRC1Q96MC2 740 aa8.36□□□□□ -1.07
VRK1-205ENST00000555402 ACBD3Q9H3P7 528 aa8.36□□□□□ -1.07
VRK1-205ENST00000555402 CAPN10Q9HC96 672 aa8.36□□□□□ -1.07
VRK1-205ENST00000555402 PCDHGB7Q9Y5F8 929 aa8.36□□□□□ -1.07
VRK1-205ENST00000555402 PRICKLE3O43900 615 aaPredicted RBP8.35□□□□□ -1.07
VRK1-205ENST00000555402 FKTNO75072 461 aa8.35□□□□□ -1.07
VRK1-205ENST00000555402 CHMP4BP1P59074 171 aa8.35□□□□□ -1.07
VRK1-205ENST00000555402 GNL2Q13823 731 aaKnown RBP8.35□□□□□ -1.07
VRK1-205ENST00000555402 KIR3DS1Q14943 382 aa8.35□□□□□ -1.07
VRK1-205ENST00000555402 RTP5Q14D33 572 aa8.35□□□□□ -1.07
VRK1-205ENST00000555402 GALNT18Q6P9A2 607 aa8.35□□□□□ -1.07
VRK1-205ENST00000555402 ZNF654Q8IZM8 581 aa8.35□□□□□ -1.07
VRK1-205ENST00000555402 GATAD2BQ8WXI9 593 aa8.35□□□□□ -1.07
VRK1-205ENST00000555402 FADS2P1A8MWK0 482 aa8.34□□□□□ -1.07
VRK1-205ENST00000555402 BUB1BO60566 1050 aaPredicted RBP8.34□□□□□ -1.07
VRK1-205ENST00000555402 DNAJA2O60884 412 aa8.34□□□□□ -1.07
VRK1-205ENST00000555402 ARL4AP40617 200 aa8.34□□□□□ -1.07
VRK1-205ENST00000555402 SF3A1Q15459 793 aaKnown RBP8.34□□□□□ -1.07
VRK1-205ENST00000555402 BBS9Q3SYG4 887 aa8.34□□□□□ -1.07
VRK1-205ENST00000555402 NOC4LQ9BVI4 516 aaKnown RBP8.34□□□□□ -1.07
VRK1-205ENST00000555402 TNFRSF10DQ9UBN6 386 aa8.34□□□□□ -1.07
VRK1-205ENST00000555402 DDX41Q9UJV9 622 aaKnown RBP8.34□□□□□ -1.07
VRK1-205ENST00000555402 FFAR3O14843 346 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 HTR3BO95264 441 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 F13A1P00488 732 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 SYPP08247 313 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 KCNC1P48547 511 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 NCKAP1LP55160 1127 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 TMEM62Q0P6H9 643 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 CAMK2GQ13555 558 aaPredicted RBP8.33□□□□□ -1.08
VRK1-205ENST00000555402 LAPTM5Q13571 262 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 PUM1Q14671 1186 aaKnown RBP eCLIP8.33□□□□□ -1.08
VRK1-205ENST00000555402 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 HSF5Q4G112 596 aaPredicted RBP8.33□□□□□ -1.08
VRK1-205ENST00000555402 TMC3Q7Z5M5 1100 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 MYRFQ9Y2G1 1151 aa8.33□□□□□ -1.08
VRK1-205ENST00000555402 INPP5FQ9Y2H2 1132 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms