RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZKSCAN1P17029 563 aaPredicted RBP14.21□□□□□ -0.13
SRP54-206ENST00000555317 STAT3P40763 770 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 SLC4A3P48751 1232 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 TMEM132BQ14DG7 1078 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 SART3Q15020 963 aaKnown RBP14.21□□□□□ -0.13
SRP54-206ENST00000555317 SNRNP48Q6IEG0 339 aaKnown RBP14.21□□□□□ -0.13
SRP54-206ENST00000555317 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 KCTD1Q719H9 257 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 DGKHQ86XP1 1220 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 MAP4K1Q92918 833 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 TEX13BQ9BXU2 312 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 GJD2Q9UKL4 321 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 ADAMTS5Q9UNA0 930 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 TNKSO95271 1327 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 FCER1AP12319 257 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
SRP54-206ENST00000555317 PTPREP23469 700 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 NOVP48745 357 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 MAP2K5Q13163 448 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 GRB14Q14449 540 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 MORN1Q5T089 497 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 RNF20Q5VTR2 975 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 DPP9Q86TI2 863 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 RIOX2Q8IUF8 465 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 CPXCR1Q8N123 301 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 NCOA7Q8NI08 942 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 LSG1Q9H089 658 aaKnown RBP14.2□□□□□ -0.14
SRP54-206ENST00000555317 RNF208Q9H0X6 261 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 ZSWIM5Q9P217 1185 aa14.2□□□□□ -0.14
SRP54-206ENST00000555317 RBBP6Q7Z6E9 1792 aaKnown RBP14.19□□□□□ -0.14
SRP54-206ENST00000555317 E7EWF7 191 aa14.19□□□□□ -0.14
SRP54-206ENST00000555317 PLA2G6O60733 806 aa14.19□□□□□ -0.14
SRP54-206ENST00000555317 CCL5P13501 91 aa14.19□□□□□ -0.14
SRP54-206ENST00000555317 OAZ1P54368 228 aa14.19□□□□□ -0.14
SRP54-206ENST00000555317 KCTD2Q14681 263 aa14.19□□□□□ -0.14
SRP54-206ENST00000555317 IFIT1BQ5T764 474 aaKnown RBP14.19□□□□□ -0.14
SRP54-206ENST00000555317 ENAHQ8N8S7 591 aaPredicted RBP14.19□□□□□ -0.14
SRP54-206ENST00000555317 PNMA1Q8ND90 353 aa14.19□□□□□ -0.14
SRP54-206ENST00000555317 MMP19Q99542 508 aa14.19□□□□□ -0.14
SRP54-206ENST00000555317 SLC38A10Q9HBR0 1119 aa14.19□□□□□ -0.14
SRP54-206ENST00000555317 ZNF214Q9UL59 606 aaPredicted RBP14.19□□□□□ -0.14
SRP54-206ENST00000555317 FRMPD2Q68DX3 1309 aaPredicted RBP14.18□□□□□ -0.14
SRP54-206ENST00000555317 ZNF236Q9UL36 1845 aa14.18□□□□□ -0.14
SRP54-206ENST00000555317 ZNFX1Q9P2E3 1918 aaKnown RBP14.18□□□□□ -0.14
SRP54-206ENST00000555317 ADORA2AP29274 412 aa14.18□□□□□ -0.14
SRP54-206ENST00000555317 MFSD14CQ5VZR4 134 aa14.18□□□□□ -0.14
SRP54-206ENST00000555317 ABRAQ8N0Z2 381 aa14.18□□□□□ -0.14
SRP54-206ENST00000555317 NKX2-3Q8TAU0 364 aa14.18□□□□□ -0.14
SRP54-206ENST00000555317 RAVER2Q9HCJ3 691 aaKnown RBP14.18□□□□□ -0.14
SRP54-206ENST00000555317 GPCPD1Q9NPB8 672 aa14.18□□□□□ -0.14
SRP54-206ENST00000555317 PDE4DIPQ5VU43 2346 aa14.18□□□□□ -0.14
SRP54-206ENST00000555317 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
SRP54-206ENST00000555317 ATP2A1O14983 1001 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 PDHBP11177 359 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 MLLT1Q03111 559 aaPredicted RBP14.17□□□□□ -0.14
SRP54-206ENST00000555317 MTFR1Q15390 333 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 GPATCH4Q5T3I0 446 aaKnown RBP14.17□□□□□ -0.14
SRP54-206ENST00000555317 SYDE2Q5VT97 1194 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 CCDC174Q6PII3 467 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 RASGRP2Q7LDG7 609 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 REPS2Q8NFH8 660 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 TRIB2Q92519 343 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 USP6NLQ92738 828 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 UNC93B1Q9H1C4 597 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 FBXO40Q9UH90 709 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 PRR12Q9ULL5 1215 aa14.17□□□□□ -0.14
SRP54-206ENST00000555317 BRCA2P51587 3418 aa14.16□□□□□ -0.14
SRP54-206ENST00000555317 POTEFA5A3E0 1075 aa14.16□□□□□ -0.14
SRP54-206ENST00000555317 SLC27A2O14975 620 aa14.16□□□□□ -0.14
SRP54-206ENST00000555317 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
SRP54-206ENST00000555317 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
SRP54-206ENST00000555317 WTAPQ15007 396 aa14.16□□□□□ -0.14
SRP54-206ENST00000555317 CREB3L3Q68CJ9 461 aa14.16□□□□□ -0.14
SRP54-206ENST00000555317 CYB5R4Q7L1T6 521 aa14.16□□□□□ -0.14
SRP54-206ENST00000555317 ANKS1AQ92625 1134 aa14.16□□□□□ -0.14
SRP54-206ENST00000555317 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
SRP54-206ENST00000555317 PLXNA1Q9UIW2 1896 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 DHX16O60231 1041 aaKnown RBP14.15□□□□□ -0.14
SRP54-206ENST00000555317 REC8O95072 547 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 GJB1P08034 283 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 HOXC6P09630 235 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 PARP1P09874 1014 aaKnown RBP14.15□□□□□ -0.14
SRP54-206ENST00000555317 MCM5P33992 734 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 SLC16A2P36021 539 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 RGS19P49795 217 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 CCL14Q16627 93 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 TKFCQ3LXA3 575 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 ASPRV1Q53RT3 343 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 TMEM67Q5HYA8 995 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 ANKRD35Q8N283 1001 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 CHST13Q8NET6 341 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 DDX11Q96FC9 970 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.15□□□□□ -0.14
SRP54-206ENST00000555317 ACAD9Q9H845 621 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 PNMA2Q9UL42 364 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 CCPG1Q9ULG6 757 aa14.15□□□□□ -0.14
SRP54-206ENST00000555317 RPTORQ8N122 1335 aa14.15□□□□□ -0.15
SRP54-206ENST00000555317 GOLGA8HP0CJ92 632 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 SNHG28P0DPA3 235 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms