RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MRGPRX3Q96LB0 322 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 FEZ1Q99689 392 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 GPR62Q9BZJ7 368 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 TRIT1Q9H3H1 467 aaKnown RBP7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 ARHGEF4Q9NR80 690 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 ANKRD62A6NC57 917 aa7.86□□□□□ -1.15
CKS1BP1-201ENST00000555221 PRAMEF1O95521 474 aa7.86□□□□□ -1.15
CKS1BP1-201ENST00000555221 FGFR1P11362 822 aa7.86□□□□□ -1.15
CKS1BP1-201ENST00000555221 PPP2R5DQ14738 602 aa7.86□□□□□ -1.15
CKS1BP1-201ENST00000555221 KIAA0907Q7Z7F0 614 aaPredicted RBP7.86□□□□□ -1.15
CKS1BP1-201ENST00000555221 TMX1Q9H3N1 280 aa7.86□□□□□ -1.15
CKS1BP1-201ENST00000555221 GPATCH2Q9NW75 528 aa7.86□□□□□ -1.15
CKS1BP1-201ENST00000555221 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.86□□□□□ -1.15
CKS1BP1-201ENST00000555221 SBNO2Q9Y2G9 1366 aa7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 GSNP06396 782 aa7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 OXCT1P55809 520 aa7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 DOC2BQ14184 412 aa7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 CWF19L1Q69YN2 538 aaKnown RBP7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 SCUBE1Q8IWY4 988 aa7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 ZNF655Q8N720 491 aaPredicted RBP7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 DAGLBQ8NCG7 672 aa7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 CCDC140Q96MF4 163 aa7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 DHRS4Q9BTZ2 278 aa7.85□□□□□ -1.15
CKS1BP1-201ENST00000555221 TRBV23-1A0A0A0MS06 115 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 KCNH1O95259 989 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 CEACAM5P06731 702 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 SRFP11831 508 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 ITIH2P19823 946 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 CLCN7P51798 805 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 AMPD2Q01433 879 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 POU4F1Q01851 419 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 ZNF662Q6ZS27 426 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 BTN2A2Q8WVV5 523 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 ZDHHC15Q96MV8 337 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 HDAC8Q9BY41 377 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 LRRC4CQ9HCJ2 640 aa7.84□□□□□ -1.15
CKS1BP1-201ENST00000555221 SHISA3A0PJX4 238 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 MSTNO14793 375 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 CYP26A1O43174 497 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 ASMTLO95671 621 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 CAPNS1P04632 268 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 PABPC1P11940 636 aaKnown RBP7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 HOXC12P31275 282 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 NKPD1Q17RQ9 610 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 NKAPLQ5M9Q1 402 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 GTF2IRD2BQ6EKJ0 949 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 NSMFQ6X4W1 530 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 THAP5Q7Z6K1 395 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 GTF2IRD2Q86UP8 949 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 FAM181AQ8N9Y4 354 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 LGR4Q9BXB1 951 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 DUSP15Q9H1R2 295 aaPredicted RBP7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 ST14Q9Y5Y6 855 aa7.83□□□□□ -1.16
CKS1BP1-201ENST00000555221 DNAJC25-GNG10A0A024R161 153 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 H0Y8X5 98 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 MEIS1O00470 390 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 PRODHO43272 600 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 TBX1O43435 398 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 SUMO1P63165 101 aaKnown RBP7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 RSPO4Q2I0M5 234 aaPredicted RBP7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 RNF187Q5TA31 235 aaPredicted RBP7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 CDKAL1Q5VV42 579 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 FOXB2Q5VYV0 432 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 SPACA3Q8IXA5 215 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 NETO1Q8TDF5 533 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 KISS1RQ969F8 398 aaPredicted RBP7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 EXOC2Q96KP1 924 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 SPOCK3Q9BQ16 436 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 IER2Q9BTL4 223 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 NKX2-4Q9H2Z4 354 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 PIM2Q9P1W9 311 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 PLAAQ9Y263 795 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 MRPS23Q9Y3D9 190 aaKnown RBP7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 PRKAB1Q9Y478 270 aa7.82□□□□□ -1.16
CKS1BP1-201ENST00000555221 PROCP04070 461 aa7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 L1CAMP32004 1257 aa7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 GRIA2P42262 883 aa7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 NOP2P46087 812 aaKnown RBP7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 IFI16Q16666 785 aaKnown RBP7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 FAM209AQ5JX71 171 aa7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 YOD1Q5VVQ6 348 aaPredicted RBP7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 TSPYL5Q86VY4 417 aaPredicted RBP7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 ZDHHC13Q8IUH4 622 aa7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 KCTD13Q8WZ19 329 aa7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 CYP26B1Q9NR63 512 aa7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 SNX11Q9Y5W9 270 aa7.81□□□□□ -1.16
CKS1BP1-201ENST00000555221 TMEM265A0A087WTH1 108 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 PPP1R12AO14974 1030 aaPredicted RBP7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 DYRK3O43781 588 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 CPP00450 1065 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 SNRPB2P08579 225 aaKnown RBP7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 FOSL1P15407 271 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 BMP8BP34820 402 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 CTSKP43235 329 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 MAP4K2Q12851 820 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 TKFCQ3LXA3 575 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 CRTC3Q6UUV7 619 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 OSBP2Q969R2 916 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 TCTN2Q96GX1 697 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 HSPA12BQ96MM6 686 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms