RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 OVOS1Q6IE37 1185 aa8.81□□□□□ -1
VRK1-203ENST00000555067 HDAC8Q9BY41 377 aa8.81□□□□□ -1
VRK1-203ENST00000555067 EHMT1Q9H9B1 1298 aa8.81□□□□□ -1
VRK1-203ENST00000555067 IRS4O14654 1257 aaPredicted RBP8.8□□□□□ -1
VRK1-203ENST00000555067 N4BP3O15049 544 aa8.8□□□□□ -1
VRK1-203ENST00000555067 CCNFP41002 786 aa8.8□□□□□ -1
VRK1-203ENST00000555067 CRKP46108 304 aa8.8□□□□□ -1
VRK1-203ENST00000555067 EPHB3P54753 998 aa8.8□□□□□ -1
VRK1-203ENST00000555067 ADGRF1Q5T601 910 aa8.8□□□□□ -1
VRK1-203ENST00000555067 RNF111Q6ZNA4 994 aa8.8□□□□□ -1
VRK1-203ENST00000555067 REXO1Q8N1G1 1221 aaKnown RBP8.8□□□□□ -1
VRK1-203ENST00000555067 ADAMTS1Q9UHI8 967 aa8.8□□□□□ -1
VRK1-203ENST00000555067 ZBTB7CA1YPR0 619 aa8.79□□□□□ -1
VRK1-203ENST00000555067 APOBRQ0VD83 1088 aa8.79□□□□□ -1
VRK1-203ENST00000555067 DAGLBQ8NCG7 672 aa8.79□□□□□ -1
VRK1-203ENST00000555067 FEZF2Q8TBJ5 459 aa8.79□□□□□ -1
VRK1-203ENST00000555067 CNNM2Q9H8M5 875 aa8.79□□□□□ -1
VRK1-203ENST00000555067 CNTD2Q9H8S5 307 aa8.79□□□□□ -1
VRK1-203ENST00000555067 CRTAC1Q9NQ79 661 aa8.79□□□□□ -1
VRK1-203ENST00000555067 SEZ6Q53EL9 994 aa8.78□□□□□ -1
VRK1-203ENST00000555067 NBPF12Q5TAG4 269 aaPredicted RBP8.78□□□□□ -1
VRK1-203ENST00000555067 NLRC3Q7RTR2 1065 aa8.78□□□□□ -1
VRK1-203ENST00000555067 SIRT2Q8IXJ6 389 aa8.78□□□□□ -1
VRK1-203ENST00000555067 ZNF655Q8N720 491 aaPredicted RBP8.78□□□□□ -1
VRK1-203ENST00000555067 BORCS6Q96GS4 357 aa8.78□□□□□ -1
VRK1-203ENST00000555067 SIRT5Q9NXA8 310 aa8.78□□□□□ -1
VRK1-203ENST00000555067 UBP1Q9NZI7 540 aa8.78□□□□□ -1
VRK1-203ENST00000555067 NRDCO43847 1150 aa8.77□□□□□ -1.01
VRK1-203ENST00000555067 ZNF165P49910 485 aa8.77□□□□□ -1.01
VRK1-203ENST00000555067 YBX1P67809 324 aaKnown RBP8.77□□□□□ -1.01
VRK1-203ENST00000555067 LRRFIP1Q32MZ4 808 aaKnown RBP8.77□□□□□ -1.01
VRK1-203ENST00000555067 NBPF9Q3BBW0 867 aa8.77□□□□□ -1.01
VRK1-203ENST00000555067 GK5Q6ZS86 529 aa8.77□□□□□ -1.01
VRK1-203ENST00000555067 TMEFF1Q8IYR6 380 aa8.77□□□□□ -1.01
VRK1-203ENST00000555067 ATG4CQ96DT6 458 aa8.77□□□□□ -1.01
VRK1-203ENST00000555067 TEPSINQ96N21 525 aa8.77□□□□□ -1.01
VRK1-203ENST00000555067 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
VRK1-203ENST00000555067 CCDC9Q9Y3X0 531 aaKnown RBP8.77□□□□□ -1.01
VRK1-203ENST00000555067 MEIS3P2A8K0S8 358 aa8.76□□□□□ -1.01
VRK1-203ENST00000555067 CLEC3AO75596 197 aa8.76□□□□□ -1.01
VRK1-203ENST00000555067 POLR2BP30876 1174 aaKnown RBP8.76□□□□□ -1.01
VRK1-203ENST00000555067 VIPR1P32241 457 aa8.76□□□□□ -1.01
VRK1-203ENST00000555067 PCBP3P57721 371 aaKnown RBP8.76□□□□□ -1.01
VRK1-203ENST00000555067 ERICH6BQ5W0A0 696 aa8.76□□□□□ -1.01
VRK1-203ENST00000555067 SP8Q8IXZ3 490 aa8.76□□□□□ -1.01
VRK1-203ENST00000555067 MCM4P33991 863 aa8.75□□□□□ -1.01
VRK1-203ENST00000555067 CLCQ05315 142 aa8.75□□□□□ -1.01
VRK1-203ENST00000555067 EFEMP1Q12805 493 aa8.75□□□□□ -1.01
VRK1-203ENST00000555067 SLITRK4Q8IW52 837 aa8.75□□□□□ -1.01
VRK1-203ENST00000555067 USHBP1Q8N6Y0 703 aa8.75□□□□□ -1.01
VRK1-203ENST00000555067 NKD1Q969G9 470 aa8.75□□□□□ -1.01
VRK1-203ENST00000555067 TCTN2Q96GX1 697 aa8.75□□□□□ -1.01
VRK1-203ENST00000555067 SSU72P8A0A1W2PR75 194 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 TNFRSF10CO14798 259 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 USP2O75604 605 aaPredicted RBP8.74□□□□□ -1.01
VRK1-203ENST00000555067 RPL10P27635 214 aaKnown RBP8.74□□□□□ -1.01
VRK1-203ENST00000555067 KIR2DL1P43626 348 aaPredicted RBP8.74□□□□□ -1.01
VRK1-203ENST00000555067 KIR2DL2P43627 348 aaPredicted RBP8.74□□□□□ -1.01
VRK1-203ENST00000555067 TMC3Q7Z5M5 1100 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 KIAA0825Q8IV33 1275 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 ZDHHC14Q8IZN3 488 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 TMEM87AQ8NBN3 555 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 LINC00116Q8NCU8 138 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 FOXP3Q9BZS1 431 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 LUC7LQ9NQ29 371 aaKnown RBP8.74□□□□□ -1.01
VRK1-203ENST00000555067 TCFL5Q9UL49 500 aa8.74□□□□□ -1.01
VRK1-203ENST00000555067 SIGLEC6O43699 453 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 NME1P15531 152 aaKnown RBP8.73□□□□□ -1.01
VRK1-203ENST00000555067 CDR1P51861 262 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 VMACQ2NL98 169 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 WAPLQ7Z5K2 1190 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 FAM129CQ86XR2 697 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 MAP6Q96JE9 813 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 SPON2Q9BUD6 331 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 TMPRSS5Q9H3S3 457 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 ZMYM5Q9UJ78 669 aa8.73□□□□□ -1.01
VRK1-203ENST00000555067 ZC3H12DA2A288 527 aaKnown RBP8.72□□□□□ -1.01
VRK1-203ENST00000555067 ZNF16P17020 682 aaPredicted RBP8.72□□□□□ -1.01
VRK1-203ENST00000555067 ENDOUP21128 410 aaKnown RBP8.72□□□□□ -1.01
VRK1-203ENST00000555067 SNW1Q13573 536 aaKnown RBP8.72□□□□□ -1.01
VRK1-203ENST00000555067 SPATS1Q496A3 300 aa8.72□□□□□ -1.01
VRK1-203ENST00000555067 SYT8Q8NBV8 401 aa8.72□□□□□ -1.01
VRK1-203ENST00000555067 PRAMEF1O95521 474 aa8.71□□□□□ -1.02
VRK1-203ENST00000555067 PNLIPP16233 465 aa8.71□□□□□ -1.02
VRK1-203ENST00000555067 ERVFRD-1P60508 538 aa8.71□□□□□ -1.02
VRK1-203ENST00000555067 TMCO4Q5TGY1 634 aa8.71□□□□□ -1.02
VRK1-203ENST00000555067 CNKSR3Q6P9H4 555 aa8.71□□□□□ -1.02
VRK1-203ENST00000555067 MZB1Q8WU39 189 aa8.71□□□□□ -1.02
VRK1-203ENST00000555067 PRDM14Q9GZV8 571 aa8.71□□□□□ -1.02
VRK1-203ENST00000555067 MKRN2Q9H000 416 aaKnown RBP8.71□□□□□ -1.02
VRK1-203ENST00000555067 SYPP08247 313 aa8.7□□□□□ -1.02
VRK1-203ENST00000555067 ZNF76P36508 570 aa8.7□□□□□ -1.02
VRK1-203ENST00000555067 ZXDCQ2QGD7 858 aaPredicted RBP8.7□□□□□ -1.02
VRK1-203ENST00000555067 BBS9Q3SYG4 887 aa8.7□□□□□ -1.02
VRK1-203ENST00000555067 LINC01356Q8N9X3 169 aa8.7□□□□□ -1.02
VRK1-203ENST00000555067 EAF1Q96JC9 268 aaPredicted RBP8.7□□□□□ -1.02
VRK1-203ENST00000555067 ZNF512BQ96KM6 892 aaPredicted RBP8.7□□□□□ -1.02
VRK1-203ENST00000555067 SLC6A18Q96N87 628 aa8.7□□□□□ -1.02
VRK1-203ENST00000555067 ADAM7Q9H2U9 754 aa8.7□□□□□ -1.02
VRK1-203ENST00000555067 METTL5Q9NRN9 209 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms