RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	CLEC3A	O75596	197 aa		8.04	□□□□□ -1.12
PSMC6-208	ENST00000554956	NBPF12	Q5TAG4	269 aa	Predicted RBP	8.04	□□□□□ -1.12
PSMC6-208	ENST00000554956	CBLL1	Q75N03	491 aa		8.04	□□□□□ -1.12
PSMC6-208	ENST00000554956	PI4K2B	Q8TCG2	481 aa		8.04	□□□□□ -1.12
PSMC6-208	ENST00000554956	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	8.04	□□□□□ -1.12
PSMC6-208	ENST00000554956	TRO	Q12816	1431 aa	Predicted RBP	8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	MAGI2	Q86UL8	1455 aa		8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	SRF	P11831	508 aa		8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	TPP2	P29144	1249 aa	Predicted RBP	8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	SNW1	Q13573	536 aa	Known RBP	8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	COL9A2	Q14055	689 aa	Predicted RBP	8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	ZYX	Q15942	572 aa	Known RBP	8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	LRRN4CL	Q8ND94	238 aa		8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	GPR62	Q9BZJ7	368 aa		8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	RC3H2	Q9HBD1	1191 aa	Known RBP	8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	KIF14	Q15058	1648 aa		8.03	□□□□□ -1.12
PSMC6-208	ENST00000554956	ATP10A	O60312	1499 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956		E9PSI1	815 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	ESR1	P03372	595 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	RNF4	P78317	190 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	GAB4	Q2WGN9	574 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	MCTP1	Q6DN14	999 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	CREG2	Q8IUH2	290 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	RBBP8NL	Q8NC74	664 aa	Predicted RBP	8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	SPATA32	Q96LK8	384 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	SRRT	Q9BXP5	876 aa	Known RBP	8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	CAPN10	Q9HC96	672 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	IGSF5	Q9NSI5	407 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	GPATCH2	Q9NW75	528 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	CDK11A	Q9UQ88	783 aa	Predicted RBP	8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	ARHGEF12	Q9NZN5	1544 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	TRAPPC8	Q9Y2L5	1435 aa		8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	RIMS1	Q86UR5	1692 aa	Known RBP	8.02	□□□□□ -1.13
PSMC6-208	ENST00000554956	TAL1	P17542	331 aa	Predicted RBP	8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956	CCNF	P41002	786 aa		8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956	EIF6	P56537	245 aa	Known RBP	8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956	TDRD10	Q5VZ19	366 aa	Known RBP	8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956	SLC23A3	Q6PIS1	610 aa		8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956	TMC3	Q7Z5M5	1100 aa		8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956	TSPYL5	Q86VY4	417 aa	Predicted RBP	8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956	TM9SF2	Q99805	663 aa		8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956	TRIT1	Q9H3H1	467 aa	Known RBP	8.01	□□□□□ -1.13
PSMC6-208	ENST00000554956		C9IYK1	514 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	GUCY2C	P25092	1073 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	NBPF9	Q3BBW0	867 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	INTS3	Q68E01	1043 aa	Known RBP	8	□□□□□ -1.13
PSMC6-208	ENST00000554956	UNC5A	Q6ZN44	842 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	PPFIBP1	Q86W92	1011 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	TAB3	Q8N5C8	712 aa	Predicted RBP	8	□□□□□ -1.13
PSMC6-208	ENST00000554956	CRBN	Q96SW2	442 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	MKRN2	Q9H000	416 aa	Known RBP	8	□□□□□ -1.13
PSMC6-208	ENST00000554956	FAM86C1	Q9NVL1	165 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	LMCD1	Q9NZU5	365 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	DUSP13	Q9UII6	198 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	MINPP1	Q9UNW1	487 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	C9orf84	Q5VXU9	1444 aa		8	□□□□□ -1.13
PSMC6-208	ENST00000554956	GIPR	P48546	466 aa		7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	NMI	Q13287	307 aa	Predicted RBP	7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	TMPRSS7	Q7RTY8	843 aa		7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	CPLX3	Q8WVH0	158 aa		7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	SHD	Q96IW2	340 aa		7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	SEC16B	Q96JE7	1060 aa		7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	SLAMF8	Q9P0V8	285 aa		7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	SUCO	Q9UBS9	1254 aa	Known RBP	7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	PCDHA11	Q9Y5I1	949 aa		7.99	□□□□□ -1.13
PSMC6-208	ENST00000554956	ARHGAP5	Q13017	1502 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	CFAP74	Q9C0B2	1584 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	CASKIN1	Q8WXD9	1431 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	ATF4	P18848	351 aa	Predicted RBP	7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	LTK	P29376	864 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	CLEC16A	Q2KHT3	1053 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	FAM169B	Q8N8A8	192 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	TINF2	Q9BSI4	451 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	HDAC8	Q9BY41	377 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	PRDM14	Q9GZV8	571 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	ZNF518A	Q6AHZ1	1483 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	LTBP3	Q9NS15	1303 aa		7.98	□□□□□ -1.13
PSMC6-208	ENST00000554956	DNAJC25-GNG10	A0A024R161	153 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	PRAMEF1	O95521	474 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	ITGB5	P18084	799 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	PMS1	P54277	932 aa	Known RBP	7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	EGR3	Q06889	387 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	RALGPS1	Q5JS13	557 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	TTC6	Q86TZ1	520 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	ANAPC16	Q96DE5	110 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	C19orf73	Q9NVV2	129 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	KDM5C	P41229	1560 aa		7.97	□□□□□ -1.13
PSMC6-208	ENST00000554956	CLIP1	P30622	1438 aa		7.96	□□□□□ -1.13
PSMC6-208	ENST00000554956	MLH3	Q9UHC1	1453 aa		7.96	□□□□□ -1.13
PSMC6-208	ENST00000554956	LRRIQ1	Q96JM4	1722 aa		7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	PAPLN	O95428	1278 aa		7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	TP53	P04637	393 aa	Predicted RBP	7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	HNRNPM	P52272	730 aa	Known RBP eCLIP	7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	DCAF15	Q66K64	600 aa		7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	DHRS1	Q96LJ7	313 aa		7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	ALPK1	Q96QP1	1244 aa		7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	GFOD1	Q9NXC2	390 aa		7.96	□□□□□ -1.14
PSMC6-208	ENST00000554956	DIP2C	Q9Y2E4	1556 aa		7.96	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms