RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 BORCS6Q96GS4 357 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 GREM2Q9H772 168 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 MAN1B1Q9UKM7 699 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 WWC3Q9ULE0 1092 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 SAR1BQ9Y6B6 198 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 BTBD18B2RXH4 712 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 PSMD14O00487 310 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 ITGA6P23229 1130 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 TOB1P50616 345 aaPredicted RBP17.48■□□□□ 0.39
SYNE3-203ENST00000554873 TTF1Q15361 905 aaPredicted RBP17.48■□□□□ 0.39
SYNE3-203ENST00000554873 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 RUFY1Q96T51 708 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 TEX33O43247 280 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 PDE6AP16499 860 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
SYNE3-203ENST00000554873 C6orf89Q6UWU4 347 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 TOM1L2Q6ZVM7 507 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 NOSTRINQ8IVI9 506 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 ARL8AQ96BM9 186 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 SAAL1Q96ER3 474 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 ZNF512BQ96KM6 892 aaPredicted RBP17.48■□□□□ 0.39
SYNE3-203ENST00000554873 STRBPQ96SI9 672 aaKnown RBP17.48■□□□□ 0.39
SYNE3-203ENST00000554873 PLCD4Q9BRC7 762 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 HOMER3Q9NSC5 361 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 SAMSN1Q9NSI8 373 aaKnown RBP17.48■□□□□ 0.39
SYNE3-203ENST00000554873 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 IPO7O95373 1038 aaKnown RBP17.47■□□□□ 0.39
SYNE3-203ENST00000554873 RPSAP08865 295 aaKnown RBP17.47■□□□□ 0.39
SYNE3-203ENST00000554873 GUCY1A2P33402 732 aa17.47■□□□□ 0.39
SYNE3-203ENST00000554873 ZC3H12AQ5D1E8 599 aaKnown RBP17.47■□□□□ 0.39
SYNE3-203ENST00000554873 CCDC121Q6ZUS5 278 aa17.47■□□□□ 0.39
SYNE3-203ENST00000554873 ELOA2Q8IYF1 753 aaPredicted RBP17.47■□□□□ 0.39
SYNE3-203ENST00000554873 TACC3Q9Y6A5 838 aa17.47■□□□□ 0.39
SYNE3-203ENST00000554873 MYO5AQ9Y4I1 1855 aaKnown RBP17.47■□□□□ 0.39
SYNE3-203ENST00000554873 PBX1P40424 430 aa17.47■□□□□ 0.39
SYNE3-203ENST00000554873 CCDC70Q6NSX1 233 aa17.47■□□□□ 0.39
SYNE3-203ENST00000554873 KDM7AQ6ZMT4 941 aa17.47■□□□□ 0.39
SYNE3-203ENST00000554873 TRMT44Q8IYL2 757 aaKnown RBP17.47■□□□□ 0.39
SYNE3-203ENST00000554873 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
SYNE3-203ENST00000554873 TCRBV5S4A2TA0A5A2 114 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 TTC36A6NLP5 189 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 PPP1R12BO60237 982 aaPredicted RBP17.46■□□□□ 0.39
SYNE3-203ENST00000554873 CASP14P31944 242 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 PHKA1P46020 1223 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 CTDSPL2Q05D32 466 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 POSTNQ15063 836 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 PAPD7Q5XG87 772 aaKnown RBP17.46■□□□□ 0.39
SYNE3-203ENST00000554873 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 LMBR1Q8WVP7 490 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 CCT8L2Q96SF2 557 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 NUCKS1Q9H1E3 243 aaKnown RBP17.46■□□□□ 0.39
SYNE3-203ENST00000554873 SLC12A7Q9Y666 1083 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 ATRNO75882 1429 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 TNS3Q68CZ2 1445 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 IFIT3O14879 490 aaKnown RBP17.46■□□□□ 0.39
SYNE3-203ENST00000554873 POLR2DO15514 142 aaKnown RBP17.46■□□□□ 0.39
SYNE3-203ENST00000554873 FMNL1O95466 1100 aaPredicted RBP17.46■□□□□ 0.39
SYNE3-203ENST00000554873 LIFRP42702 1097 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 PTGISQ16647 500 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 RUBCNQ92622 972 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 HDAC6Q9UBN7 1215 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 SERTAD1Q9UHV2 236 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 KCNJ14Q9UNX9 436 aa17.46■□□□□ 0.39
SYNE3-203ENST00000554873 SPATA31A3Q5VYP0 1347 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 AP1G2O75843 785 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 SSBP05455 408 aaKnown RBP eCLIP17.45■□□□□ 0.38
SYNE3-203ENST00000554873 PECAM1P16284 738 aaPredicted RBP17.45■□□□□ 0.38
SYNE3-203ENST00000554873 SARSP49591 514 aaKnown RBP17.45■□□□□ 0.38
SYNE3-203ENST00000554873 ATP1A2P50993 1020 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 ZNF827Q17R98 1081 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 KIF6Q6ZMV9 814 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 NLRP14Q86W24 1093 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 MYCBPAPQ8TBZ2 947 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 PARD3BQ8TEW8 1205 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 MED15Q96RN5 788 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 FBXO2Q9UK22 296 aaPredicted RBP17.45■□□□□ 0.38
SYNE3-203ENST00000554873 SRRM3A6NNA2 597 aaPredicted RBP17.45■□□□□ 0.38
SYNE3-203ENST00000554873 HSF2BPO75031 334 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 PPP1R37O75864 691 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 PTPREP23469 700 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 ERVK-24P63145 666 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 ALX1Q15699 326 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 HLFQ16534 295 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 NT5DC1Q5TFE4 455 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 EMC10Q5UCC4 262 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 GRAMD1CQ8IYS0 662 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 AIDAQ96BJ3 306 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 RRP36Q96EU6 259 aaKnown RBP17.45■□□□□ 0.38
SYNE3-203ENST00000554873 WDR17Q8IZU2 1322 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 STK36Q9NRP7 1315 aa17.45■□□□□ 0.38
SYNE3-203ENST00000554873 ENC1O14682 589 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 MMP1P03956 469 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 IFNAR1P17181 557 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 IQCEQ6IPM2 695 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 CYP26C1Q6V0L0 522 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 APTXQ7Z2E3 356 aaKnown RBP17.44■□□□□ 0.38
SYNE3-203ENST00000554873 DNAJC10Q8IXB1 793 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
SYNE3-203ENST00000554873 IFNL3Q8IZI9 196 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms