RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 GPRC5AQ8NFJ5 357 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 IGDCC4Q8TDY8 1250 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 GTF3C2Q8WUA4 911 aaPredicted RBP14.14□□□□□ -0.15
RIPK3-204ENST00000554756 DCAF4Q8WV16 495 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 KIFC2Q96AC6 838 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
RIPK3-204ENST00000554756 SLF1Q9BQI6 1058 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 PPP1R9AQ9ULJ8 1098 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 PDHBP11177 359 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 CPA1P15085 419 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 CTGFP29279 349 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 ZSCAN31Q96LW9 406 aaPredicted RBP14.14□□□□□ -0.15
RIPK3-204ENST00000554756 MORF4L1Q9UBU8 362 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 FEM1BQ9UK73 627 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 RABGAP1Q9Y3P9 1069 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 FMNL1O95466 1100 aaPredicted RBP14.13□□□□□ -0.15
RIPK3-204ENST00000554756 GOLGA8HP0CJ92 632 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 PSMA5P28066 241 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 SLC16A2P36021 539 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 PSMC4P43686 418 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 ERVK-9P63128 1117 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 ERVK-24P63145 666 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 PLS1Q14651 629 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 LBX2Q6XYB7 198 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 SH2B1Q9NRF2 756 aaPredicted RBP14.13□□□□□ -0.15
RIPK3-204ENST00000554756 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 TRIM17Q9Y577 477 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 MYPNQ86TC9 1320 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 PCNTO95613 3336 aa14.13□□□□□ -0.15
RIPK3-204ENST00000554756 SH2B2O14492 632 aaPredicted RBP14.12□□□□□ -0.15
RIPK3-204ENST00000554756 BRD1O95696 1058 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 MRE11P49959 708 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 FCGRTP55899 365 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 SNAP25P60880 206 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 NFXL1Q6ZNB6 911 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 DHX32Q7L7V1 743 aaKnown RBP14.12□□□□□ -0.15
RIPK3-204ENST00000554756 CTU1Q7Z7A3 348 aaKnown RBP14.12□□□□□ -0.15
RIPK3-204ENST00000554756 PRPF38AQ8NAV1 312 aaKnown RBP14.12□□□□□ -0.15
RIPK3-204ENST00000554756 CHURC1Q8WUH1 139 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 TMEM87BQ96K49 555 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 EFCC1Q9HA90 598 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 LY9Q9HBG7 655 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 ZSWIM6Q9HCJ5 1215 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.12□□□□□ -0.15
RIPK3-204ENST00000554756 CTDP1Q9Y5B0 961 aaPredicted RBP14.12□□□□□ -0.15
RIPK3-204ENST00000554756 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
RIPK3-204ENST00000554756 VWA5AO00534 786 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 STAT2P52630 851 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 EXOSC10Q01780 885 aaKnown RBP14.11□□□□□ -0.15
RIPK3-204ENST00000554756 ZNF543Q08ER8 600 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 FAM160B2Q86V87 743 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 CCAR1Q8IX12 1150 aaKnown RBP14.11□□□□□ -0.15
RIPK3-204ENST00000554756 TRIM47Q96LD4 638 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 UPF3BQ9BZI7 483 aaKnown RBP14.11□□□□□ -0.15
RIPK3-204ENST00000554756 ALDH8A1Q9H2A2 487 aaPredicted RBP14.11□□□□□ -0.15
RIPK3-204ENST00000554756 ZBED4O75132 1171 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 SNHG28P0DPA3 235 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 TMEM132BQ14DG7 1078 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 BLOC1S2Q6QNY1 142 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 OTOP1Q7RTM1 612 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 MB21D1Q8N884 522 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 MYL10Q9BUA6 226 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 UBA5Q9GZZ9 404 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 PORCNQ9H237 461 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 CPVLQ9H3G5 476 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 PRR12Q9ULL5 1215 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 ADAMTS5Q9UNA0 930 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 CYP46A1Q9Y6A2 500 aa14.11□□□□□ -0.15
RIPK3-204ENST00000554756 CCDC69A6NI79 296 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 TNPO2O14787 897 aaKnown RBP14.1□□□□□ -0.15
RIPK3-204ENST00000554756 HMGB1P09429 215 aaKnown RBP14.1□□□□□ -0.15
RIPK3-204ENST00000554756 PARP1P09874 1014 aaKnown RBP14.1□□□□□ -0.15
RIPK3-204ENST00000554756 CASTP20810 708 aaKnown RBP14.1□□□□□ -0.15
RIPK3-204ENST00000554756 ARHGEF6Q15052 776 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 ANKRD1Q15327 319 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 CATIPQ7Z7H3 387 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 RAB11FIP4Q86YS3 637 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 CPXCR1Q8N123 301 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 NUP133Q8WUM0 1156 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 MTA3Q9BTC8 594 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 MOV10L1Q9BXT6 1211 aaKnown RBP14.1□□□□□ -0.15
RIPK3-204ENST00000554756 SPATC1LQ9H0A9 340 aa14.1□□□□□ -0.15
RIPK3-204ENST00000554756 RAVER2Q9HCJ3 691 aaKnown RBP14.1□□□□□ -0.15
RIPK3-204ENST00000554756 CCNA1P78396 465 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 SYDE2Q5VT97 1194 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 ZNF654Q8IZM8 581 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 REPS2Q8NFH8 660 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 ZDHHC9Q9Y397 364 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 CASP8AP2Q9UKL3 1982 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 WDR19Q8NEZ3 1342 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 PLA2G6O60733 806 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 MBD3O95983 291 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 RPS6KB1P23443 525 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 AK2P54819 239 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 FGD1P98174 961 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 ASPRV1Q53RT3 343 aa14.09□□□□□ -0.15
RIPK3-204ENST00000554756 GPATCH4Q5T3I0 446 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms