RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 VPS37CA5D8V6 355 aaPredicted RBP16.6■□□□□ 0.25
SHOX2-206ENST00000554685 TOMM70O94826 608 aa16.6■□□□□ 0.25
SHOX2-206ENST00000554685 ADGRF4Q8IZF3 695 aa16.6■□□□□ 0.25
SHOX2-206ENST00000554685 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
SHOX2-206ENST00000554685 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
SHOX2-206ENST00000554685 CLMNQ96JQ2 1002 aa16.6■□□□□ 0.25
SHOX2-206ENST00000554685 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
SHOX2-206ENST00000554685 EMILIN3Q9NT22 766 aa16.6■□□□□ 0.25
SHOX2-206ENST00000554685 KCNH4Q9UQ05 1017 aa16.6■□□□□ 0.25
SHOX2-206ENST00000554685 CYTH3O43739 400 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 PPFIA3O75145 1194 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 FDX1P10109 184 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 VCAM1P19320 739 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 HMGCS2P54868 508 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 FMR1Q06787 632 aaKnown RBP eCLIP16.59■□□□□ 0.25
SHOX2-206ENST00000554685 FSTL1Q12841 308 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 KIAA1755Q5JYT7 1200 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 TTBK2Q6IQ55 1244 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 PROCA1Q8NCQ7 364 aaPredicted RBP16.59■□□□□ 0.25
SHOX2-206ENST00000554685 CCDC148Q8NFR7 591 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 MTMR8Q96EF0 704 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 VAT1LQ9HCJ6 419 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 PASKQ96RG2 1323 aa16.59■□□□□ 0.25
SHOX2-206ENST00000554685 A0A0G2JLL6 359 aaPredicted RBP16.58■□□□□ 0.24
SHOX2-206ENST00000554685 PNMA6FA0A0J9YX94 578 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 ZBTB5O15062 677 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 ABCB7O75027 752 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 BRD1O95696 1058 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 ZSCAN22P10073 491 aaPredicted RBP16.58■□□□□ 0.24
SHOX2-206ENST00000554685 SLC16A2P36021 539 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 SAFBQ15424 915 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHOX2-206ENST00000554685 PKN1Q16512 942 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 CST9Q5W186 159 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 FASTKD5Q7L8L6 764 aaKnown RBP16.58■□□□□ 0.24
SHOX2-206ENST00000554685 PRRT2Q7Z6L0 340 aaPredicted RBP16.58■□□□□ 0.24
SHOX2-206ENST00000554685 HOMER1Q86YM7 354 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 PRPF38AQ8NAV1 312 aaKnown RBP16.58■□□□□ 0.24
SHOX2-206ENST00000554685 PIGSQ96S52 555 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 TANGO6Q9C0B7 1094 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 RPAP3Q9H6T3 665 aaPredicted RBP16.58■□□□□ 0.24
SHOX2-206ENST00000554685 JMJD4Q9H9V9 463 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
SHOX2-206ENST00000554685 PNMA2Q9UL42 364 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.24
SHOX2-206ENST00000554685 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 MYPNQ86TC9 1320 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L15C9J2P7 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L13C9JLJ4 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L11C9JVI0 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L18D6R9N7 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L22D6RA61 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L17D6RBQ6 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L19D6RCP7 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L20D6RJB6 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 IRF6O14896 467 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 DTNBO60941 627 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 CALML3P27482 149 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 HUNKP57058 714 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 USP17L24Q0WX57 530 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 PABPC4Q13310 644 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHOX2-206ENST00000554685 SNAPC2Q13487 334 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 SLC35G1Q2M3R5 365 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 PPP1R18Q6NYC8 613 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 PIBF1Q8WXW3 757 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 SLF1Q9BQI6 1058 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 CPVLQ9H3G5 476 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 BRMS1Q9HCU9 246 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 PRR12Q9ULL5 1215 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
SHOX2-206ENST00000554685 TRPM7Q96QT4 1865 aa16.56■□□□□ 0.24
SHOX2-206ENST00000554685 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
SHOX2-206ENST00000554685 CDC37Q16543 378 aaPredicted RBP16.56■□□□□ 0.24
SHOX2-206ENST00000554685 KRT40Q6A162 431 aa16.56■□□□□ 0.24
SHOX2-206ENST00000554685 GALNT17Q6IS24 598 aa16.56■□□□□ 0.24
SHOX2-206ENST00000554685 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
SHOX2-206ENST00000554685 AIFM3Q96NN9 605 aa16.56■□□□□ 0.24
SHOX2-206ENST00000554685 ZSCAN16Q9H4T2 348 aaPredicted RBP16.56■□□□□ 0.24
SHOX2-206ENST00000554685 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
SHOX2-206ENST00000554685 CTDP1Q9Y5B0 961 aaPredicted RBP16.56■□□□□ 0.24
SHOX2-206ENST00000554685 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 FLOT1O75955 427 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 GTF2A2P52657 109 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 FOSBP53539 338 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 GADL1Q6ZQY3 521 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 AMNQ9BXJ7 453 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 GLT8D2Q9H1C3 349 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 RANBP17Q9H2T7 1088 aaKnown RBP16.55■□□□□ 0.24
SHOX2-206ENST00000554685 PPP1R9AQ9ULJ8 1098 aa16.55■□□□□ 0.24
SHOX2-206ENST00000554685 F13A1P00488 732 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 MMP1P03956 469 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 CETPP11597 493 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 DSG3P32926 999 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 NAPAP54920 295 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 NLRP5P59047 1200 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 GUCY1B3Q02153 619 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms