RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NPEPPSP55786 919 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 HERVK_113P62684 666 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 LRMPQ12912 555 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 PSMD2Q13200 908 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 IFIT5Q13325 482 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 MYBPC2Q14324 1141 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 SF3A1Q15459 793 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 SPECC1LQ69YQ0 1117 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 MCTP2Q6DN12 878 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 C12orf56Q8IXR9 622 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 ZNF654Q8IZM8 581 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 SRBD1Q8N5C6 995 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 SLC30A5Q8TAD4 765 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CTAGE1Q96RT6 745 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 GPHNQ9NQX3 736 aaPredicted RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CEP126Q9P2H0 1117 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CEP131Q9UPN4 1083 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 ZBTB12Q9Y330 459 aaPredicted RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 KLF18A0A0U1RQI7 1052 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 LGALS16A8MUM7 142 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ZNF213O14771 459 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 CYTH3O43739 400 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ALAS1P13196 640 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 GRIN1Q05586 938 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 WHAMMP3Q1A5X7 153 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 RRP12Q5JTH9 1297 aaKnown RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 RAD9BQ6WBX8 426 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 KIF6Q6ZMV9 814 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PROM2Q8N271 834 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 JMYQ8N9B5 988 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 FSIP1Q8NA03 581 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 LRRN4CLQ8ND94 238 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ZNF594Q96JF6 807 aaPredicted RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ANKRD2Q9GZV1 360 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ST6GALNAC4Q9H4F1 302 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 DCP1AQ9NPI6 582 aaPredicted RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 GDF3Q9NR23 364 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 TMOD3Q9NYL9 352 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 DACH1Q9UI36 760 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 INTUQ9ULD6 942 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 KCNH3Q9ULD8 1083 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PCDHA4Q9UN74 947 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PPP2R2CQ9Y2T4 447 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PCDHA3Q9Y5H8 950 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PITPNM2Q9BZ72 1349 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ZMYM2Q9UBW7 1377 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC196A0A1B0GTZ2 297 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 EIF2S2P20042 333 aaKnown RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 CHRNDQ07001 517 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 NUTM2AQ8IVF1 878 aaPredicted RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 GMCL1P1Q8NEA9 526 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 NEDD1Q8NHV4 660 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 SLCO2A1Q92959 643 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 C8orf76Q96K31 380 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 FIZ1Q96SL8 496 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 KCTD10Q9H3F6 313 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC134Q9H6E4 229 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PCDHGC5Q9Y5F6 944 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 SSU72P8A0A1W2PR75 194 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 C5orf60A6NFR6 353 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 POTEB2H3BUK9 544 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 TBX3O15119 743 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ZBTB43O43298 467 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 NRDCO43847 1150 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PNMA6AP0CW24 399 aaPredicted RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 MAPTP10636 758 aaKnown RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ZNF131P52739 623 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 HSP90AA2PQ14568 343 aaPredicted RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC152Q4G0S7 254 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 TCP11X2Q5H9J9 407 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 TTC39AQ5SRH9 613 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 YTHDF3Q7Z739 585 aaKnown RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 C7orf43Q8WVR3 580 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 EXOC4Q96A65 974 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 DNAJC19Q96DA6 116 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 TRIM44Q96DX7 344 aaPredicted RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 TMEM109Q9BVC6 243 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 FAM129AQ9BZQ8 928 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 GZF1Q9H116 711 aaPredicted RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 MRPL44Q9H9J2 332 aaKnown RBP3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PLCB1Q9NQ66 1216 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ABHD10Q9NUJ1 306 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 BLOC1S4Q9NUP1 217 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 AIPL1Q9NZN9 384 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 RAI14Q9P0K7 980 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 PCDHA5Q9Y5H7 936 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 ANKRD36A6QL64 1941 aa3.93□□□□□ -1.78
SEC23A-207ENST00000554615 H0YGN5 161 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 H7C1D1 291 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 RNF225M0QZC1 329 aaPredicted RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 AGPSO00116 658 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 FIBPO43427 364 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 NOL4O94818 638 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 KCNA4P22459 653 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 RXRBP28702 533 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 METAP2P50579 478 aaKnown RBP eCLIP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 CLDN10P78369 228 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 CLEC16AQ2KHT3 1053 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 CFAP100Q494V2 611 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SLC9C2Q5TAH2 1124 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms