RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
NPC2-205ENST00000554482 TEX13BQ9BXU2 312 aa13.35□□□□□ -0.27
NPC2-205ENST00000554482 ZHX1Q9UKY1 873 aaPredicted RBP13.35□□□□□ -0.27
NPC2-205ENST00000554482 PHF24Q9UPV7 400 aa13.35□□□□□ -0.27
NPC2-205ENST00000554482 DIS3Q9Y2L1 958 aaKnown RBP13.35□□□□□ -0.27
NPC2-205ENST00000554482 COL6A3P12111 3177 aa13.35□□□□□ -0.27
NPC2-205ENST00000554482 A0A1W2PQ45 241 aaPredicted RBP13.34□□□□□ -0.27
NPC2-205ENST00000554482 A0A1W2PQY0 241 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 TRIM43BA6NCK2 446 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 F5H6K3 240 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 RNF113AO15541 343 aaKnown RBP13.34□□□□□ -0.27
NPC2-205ENST00000554482 GPAA1O43292 621 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 PQBP1O60828 265 aaKnown RBP13.34□□□□□ -0.27
NPC2-205ENST00000554482 TLE2Q04725 743 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 KLRC3Q07444 240 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 GIMAP6Q6P9H5 292 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 ZNF444Q8N0Y2 327 aaPredicted RBP13.34□□□□□ -0.27
NPC2-205ENST00000554482 KIFC2Q96AC6 838 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 TRIM43Q96BQ3 446 aaPredicted RBP13.34□□□□□ -0.27
NPC2-205ENST00000554482 GUCD1Q96NT3 240 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 EPB41L4AQ9HCS5 686 aaPredicted RBP13.34□□□□□ -0.27
NPC2-205ENST00000554482 NYAP2Q9P242 653 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 CLIP2Q9UDT6 1046 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 MYH4Q9Y623 1939 aa13.34□□□□□ -0.27
NPC2-205ENST00000554482 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
NPC2-205ENST00000554482 M0R2C6 588 aa13.33□□□□□ -0.28
NPC2-205ENST00000554482 ZBED4O75132 1171 aa13.33□□□□□ -0.28
NPC2-205ENST00000554482 ZFYP08048 801 aaPredicted RBP13.33□□□□□ -0.28
NPC2-205ENST00000554482 CLTBP09497 229 aa13.33□□□□□ -0.28
NPC2-205ENST00000554482 ZNF865P0CJ78 1059 aaPredicted RBP13.33□□□□□ -0.28
NPC2-205ENST00000554482 GNAT2P19087 354 aa13.33□□□□□ -0.28
NPC2-205ENST00000554482 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.28
NPC2-205ENST00000554482 FAM109BQ6ICB4 259 aaPredicted RBP13.33□□□□□ -0.28
NPC2-205ENST00000554482 LRRC47Q8N1G4 583 aaKnown RBP13.33□□□□□ -0.28
NPC2-205ENST00000554482 PRPF38AQ8NAV1 312 aaKnown RBP13.33□□□□□ -0.28
NPC2-205ENST00000554482 RIPK3Q9Y572 518 aa13.33□□□□□ -0.28
NPC2-205ENST00000554482 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 DNAH12Q6ZR08 3092 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 RAG1P15918 1043 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 LRRFIP1Q32MZ4 808 aaKnown RBP13.32□□□□□ -0.28
NPC2-205ENST00000554482 ANKRD35Q8N283 1001 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 CEP95Q96GE4 821 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
NPC2-205ENST00000554482 STARD7Q9NQZ5 370 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 HOMER2Q9NSB8 354 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 TACC3Q9Y6A5 838 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 SYNGAP1Q96PV0 1343 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 SYNRGQ9UMZ2 1314 aa13.32□□□□□ -0.28
NPC2-205ENST00000554482 ADAMTS4O75173 837 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 TTLL1O95922 423 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 TSPY3P0CV98 308 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 TSPY8P0CW00 308 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 IKQ13123 557 aaPredicted RBP13.31□□□□□ -0.28
NPC2-205ENST00000554482 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
NPC2-205ENST00000554482 MSL3Q8N5Y2 521 aaKnown RBP13.31□□□□□ -0.28
NPC2-205ENST00000554482 CHMP4CQ96CF2 233 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
NPC2-205ENST00000554482 FSD1Q9BTV5 496 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 DCTPP1Q9H773 170 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 FAM184BQ9ULE4 1060 aa13.31□□□□□ -0.28
NPC2-205ENST00000554482 IGKV6D-41A0A0C4DH26 115 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 SNAI1O95863 264 aaPredicted RBP13.3□□□□□ -0.28
NPC2-205ENST00000554482 SLC3A2P08195 630 aaKnown RBP13.3□□□□□ -0.28
NPC2-205ENST00000554482 C6orf222P0C671 652 aaPredicted RBP13.3□□□□□ -0.28
NPC2-205ENST00000554482 ITGB8P26012 769 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 ACLYP53396 1101 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 PDE4BQ07343 736 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 SEC62Q99442 399 aaKnown RBP13.3□□□□□ -0.28
NPC2-205ENST00000554482 NAPBQ9H115 298 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 SLC38A10Q9HBR0 1119 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 MTMR4Q9NYA4 1195 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
NPC2-205ENST00000554482 DNAJC25-GNG10A0A024R161 153 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 MYADML2A6NDP7 307 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 PATL2C9JE40 543 aaKnown RBP13.29□□□□□ -0.28
NPC2-205ENST00000554482 ATP2A1O14983 1001 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 ERC2O15083 957 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 BMP3P12645 472 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
NPC2-205ENST00000554482 FPGSQ05932 587 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 SLFN13Q68D06 897 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 VTI1AQ96AJ9 217 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 CDX2Q99626 313 aaPredicted RBP13.29□□□□□ -0.28
NPC2-205ENST00000554482 TSEN34Q9BSV6 310 aaKnown RBP13.29□□□□□ -0.28
NPC2-205ENST00000554482 SPC25Q9HBM1 224 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.29□□□□□ -0.28
NPC2-205ENST00000554482 FBXO40Q9UH90 709 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
NPC2-205ENST00000554482 MOXD2PA6NHM9 499 aa13.28□□□□□ -0.28
NPC2-205ENST00000554482 TMEM232C9JQI7 657 aa13.28□□□□□ -0.28
NPC2-205ENST00000554482 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
NPC2-205ENST00000554482 STAT2P52630 851 aa13.28□□□□□ -0.28
NPC2-205ENST00000554482 OAZ1P54368 228 aa13.28□□□□□ -0.28
NPC2-205ENST00000554482 EPHB4P54760 987 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms