RNA–Protein interactions for RNA: ENST00000554465.5

SRSF5-207, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 3,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-207ENST00000554465 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
SRSF5-207ENST00000554465 PPFIA4O75335 1185 aa9.37□□□□□ -0.91
SRSF5-207ENST00000554465 WDHD1O75717 1129 aaPredicted RBP9.37□□□□□ -0.91
SRSF5-207ENST00000554465 SPDYE6P0CI01 402 aa9.37□□□□□ -0.91
SRSF5-207ENST00000554465 NAT1P18440 290 aa9.37□□□□□ -0.91
SRSF5-207ENST00000554465 RBM5P52756 815 aaKnown RBP eCLIP9.37□□□□□ -0.91
SRSF5-207ENST00000554465 PI16Q6UXB8 463 aa9.37□□□□□ -0.91
SRSF5-207ENST00000554465 FUCA2Q9BTY2 467 aa9.37□□□□□ -0.91
SRSF5-207ENST00000554465 TRIM5Q9C035 493 aa9.37□□□□□ -0.91
SRSF5-207ENST00000554465 ZSCAN16Q9H4T2 348 aaPredicted RBP9.37□□□□□ -0.91
SRSF5-207ENST00000554465 LRRC37A2A6NM11 1700 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 IDH1O75874 414 aaKnown RBP9.36□□□□□ -0.91
SRSF5-207ENST00000554465 FDX1P10109 184 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 IFNAR1P17181 557 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 BTDP43251 543 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 ARID5BQ14865 1188 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 CCDC186Q7Z3E2 898 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 APOBEC3FQ8IUX4 373 aaKnown RBP9.36□□□□□ -0.91
SRSF5-207ENST00000554465 MTMR8Q96EF0 704 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 CNTNAP1P78357 1384 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 SCRN1Q12765 414 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 TNFAIP1Q13829 316 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 PPP2R5AQ15172 486 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 PDCD2Q16342 344 aaPredicted RBP9.36□□□□□ -0.91
SRSF5-207ENST00000554465 CIAPIN1Q6FI81 312 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 RNF26Q9BY78 433 aaPredicted RBP9.36□□□□□ -0.91
SRSF5-207ENST00000554465 VEZTQ9HBM0 779 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 CBX8Q9HC52 389 aa9.36□□□□□ -0.91
SRSF5-207ENST00000554465 UTP6Q9NYH9 597 aaKnown RBP9.36□□□□□ -0.91
SRSF5-207ENST00000554465 ESYT2A0FGR8 921 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 C21orf2O43822 256 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 KINO60870 393 aaKnown RBP9.35□□□□□ -0.91
SRSF5-207ENST00000554465 BTNL9Q6UXG8 535 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 TBC1D10CQ8IV04 446 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 STK11IPQ8N1F8 1099 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 PIBF1Q8WXW3 757 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 C16orf45Q96MC5 204 aaPredicted RBP9.35□□□□□ -0.91
SRSF5-207ENST00000554465 GLT8D2Q9H1C3 349 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 C6orf229H3BNL8 230 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 PRDX5P30044 214 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 CYP2C19P33261 490 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 BMS1Q14692 1282 aaKnown RBP9.35□□□□□ -0.91
SRSF5-207ENST00000554465 GRM4Q14833 912 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 WWC2Q6AWC2 1192 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 SPZ1Q9BXG8 430 aa9.35□□□□□ -0.91
SRSF5-207ENST00000554465 MYPNQ86TC9 1320 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 PES1O00541 588 aaKnown RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 VDRP11473 427 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 PAX3P23760 479 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 COPB2P35606 906 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 MAP2K2P36507 400 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 TNNI2P48788 182 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 NAP1L1P55209 391 aaKnown RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 ISM2Q6H9L7 571 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 CDC42EP5Q6NZY7 148 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 DCAF4Q8WV16 495 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 ZSCAN10Q96SZ4 725 aaPredicted RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 POLR3CQ9BUI4 534 aaPredicted RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 ARMT1Q9H993 441 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 MAP3K20Q9NYL2 800 aaKnown RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 PI4KBQ9UBF8 816 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 ZNF232Q9UNY5 417 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 HPS5Q9UPZ3 1129 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 PPIP5K2O43314 1243 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 PRPF3O43395 683 aaKnown RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 IMPDH2P12268 514 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 PDIA3P30101 505 aaKnown RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 CHRNA5P30532 468 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 ICA1Q05084 483 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 NAA30Q147X3 362 aaPredicted RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 FILIP1LQ4L180 1135 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 RALYLQ86SE5 291 aaKnown RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 GMCL1Q96IK5 515 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 SPDYE4A6NLX3 237 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 IPO5O00410 1097 aaKnown RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 PRC1O43663 620 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 FMNL1O95466 1100 aaPredicted RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 POLR3DP05423 398 aaPredicted RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 HLA-DOAP06340 250 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 RXRAP19793 462 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 ZNF165P49910 485 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 IFT88Q13099 833 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 NTRK3Q16288 839 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 USP50Q70EL3 339 aaPredicted RBP9.34□□□□□ -0.91
SRSF5-207ENST00000554465 EFCAB13Q8IY85 973 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 FAM200AQ8TCP9 573 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 FAM53CQ9NYF3 392 aa9.34□□□□□ -0.91
SRSF5-207ENST00000554465 NEDD4P46934 1319 aa9.33□□□□□ -0.92
SRSF5-207ENST00000554465 NOM1Q5C9Z4 860 aaKnown RBP9.33□□□□□ -0.92
SRSF5-207ENST00000554465 FILIP1Q7Z7B0 1213 aa9.33□□□□□ -0.92
SRSF5-207ENST00000554465 TRIM74Q86UV6 250 aa9.33□□□□□ -0.92
SRSF5-207ENST00000554465 TRIM73Q86UV7 250 aa9.33□□□□□ -0.92
SRSF5-207ENST00000554465 ANKRD20A12PQ8NF67 263 aa9.33□□□□□ -0.92
SRSF5-207ENST00000554465 SH3RF3Q8TEJ3 882 aaPredicted RBP9.33□□□□□ -0.92
SRSF5-207ENST00000554465 C12orf42Q96LP6 360 aa9.33□□□□□ -0.92
SRSF5-207ENST00000554465 FAM237AA0A1B0GTK4 181 aa9.33□□□□□ -0.92
SRSF5-207ENST00000554465 PTPDC1A2A3K4 754 aa9.33□□□□□ -0.92
SRSF5-207ENST00000554465 BIN1O00499 593 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms