RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
SPTLC2-202ENST00000554365 VWA5AO00534 786 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 CDC45O75419 566 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 TAL1P17542 331 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 UBE3CQ15386 1083 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 ZNF792Q3KQV3 632 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 C1orf53Q5VUE5 145 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 CDX2Q99626 313 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 PPP1R9AQ9ULJ8 1098 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 ADAMTS5Q9UNA0 930 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 PARP14Q460N5 1801 aa16.65■□□□□ 0.26
SPTLC2-202ENST00000554365 COL11A1P12107 1806 aaPredicted RBP16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 TICAM2Q86XR7 235 aa16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 LENG1Q96BZ8 264 aaPredicted RBP16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 NUP88Q99567 741 aaPredicted RBP16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 PUS7LQ9H0K6 701 aaKnown RBP16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 IL25Q9H293 177 aa16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 SEMA6BQ9H3T3 888 aa16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 ZNF214Q9UL59 606 aaPredicted RBP16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 CNPY2Q9Y2B0 182 aa16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 TACC3Q9Y6A5 838 aa16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 UNC80Q8N2C7 3258 aa16.64■□□□□ 0.25
SPTLC2-202ENST00000554365 PQBP1O60828 265 aaKnown RBP16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 CLTBP09497 229 aa16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 AKR1A1P14550 325 aa16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 COPB2P35606 906 aa16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 SLC4A3P48751 1232 aa16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 SMAD3P84022 425 aaKnown RBP16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 ARPP21Q9UBL0 812 aaPredicted RBP16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 DIS3Q9Y2L1 958 aaKnown RBP16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 LAMA2P24043 3122 aaKnown RBP16.63■□□□□ 0.25
SPTLC2-202ENST00000554365 A0A1W2PQ45 241 aaPredicted RBP16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 A0A1W2PQY0 241 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 RNF113AO15541 343 aaKnown RBP16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 ZNF865P0CJ78 1059 aaPredicted RBP16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 RAG1P15918 1043 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 ITGB8P26012 769 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 NMIQ13287 307 aaPredicted RBP16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 REPS2Q8NFH8 660 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 MAFAQ8NHW3 353 aaPredicted RBP16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 DDX11Q96FC9 970 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 RNPC3Q96LT9 517 aaKnown RBP16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 SLF1Q9BQI6 1058 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 CUL9Q8IWT3 2517 aa16.62■□□□□ 0.25
SPTLC2-202ENST00000554365 A0A0D9SFI3 127 aa16.61■□□□□ 0.25
SPTLC2-202ENST00000554365 ZMYM1Q5SVZ6 1142 aa16.61■□□□□ 0.25
SPTLC2-202ENST00000554365 SNRNP48Q6IEG0 339 aaKnown RBP16.61■□□□□ 0.25
SPTLC2-202ENST00000554365 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
SPTLC2-202ENST00000554365 TTYH1Q9H313 450 aaPredicted RBP16.61■□□□□ 0.25
SPTLC2-202ENST00000554365 MKNK2Q9HBH9 465 aa16.61■□□□□ 0.25
SPTLC2-202ENST00000554365 TMEM39AQ9NV64 488 aa16.61■□□□□ 0.25
SPTLC2-202ENST00000554365 PLXNA1Q9UIW2 1896 aa16.61■□□□□ 0.25
SPTLC2-202ENST00000554365 MINDY4BA8MYZ0 360 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 F5H6K3 240 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 HIP1O00291 1037 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 ADAMTS4O75173 837 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 SEC24BO95487 1268 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 ZFYP08048 801 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 EPHB4P54760 987 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 FPGSQ05932 587 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 KLRC3Q07444 240 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 STRBPQ96SI9 672 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 BACH2Q9BYV9 841 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 STARD7Q9NQZ5 370 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 DIAPH3Q9NSV4 1193 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 ZHX1Q9UKY1 873 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 FAM184BQ9ULE4 1060 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 CTDP1Q9Y5B0 961 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 ROBO3Q96MS0 1386 aa16.6■□□□□ 0.25
SPTLC2-202ENST00000554365 KIAA0355O15063 1070 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 NDUFB10O96000 172 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 RASA1P20936 1047 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 ACLYP53396 1101 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 SBK1Q52WX2 424 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 NUP133Q8WUM0 1156 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 OSBP2Q969R2 916 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 KIFC2Q96AC6 838 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 SEC62Q99442 399 aaKnown RBP16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 CLIP2Q9UDT6 1046 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 RIPK3Q9Y572 518 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 SYNRGQ9UMZ2 1314 aa16.59■□□□□ 0.25
SPTLC2-202ENST00000554365 SMCHD1A6NHR9 2005 aa16.58■□□□□ 0.25
SPTLC2-202ENST00000554365 GSG1L2A8MUP6 293 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 DCDC2CA8MYV0 355 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 M0R2C6 588 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 SGSM2O43147 1006 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 ZBED4O75132 1171 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 FOSL2P15408 326 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 FAAP100Q0VG06 881 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 KCNA10Q16322 511 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms