RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 DSCC1Q9BVC3 393 aa6.33□□□□□ -1.4
PABPN1-204ENST00000554062 NKX2-4Q9H2Z4 354 aa6.33□□□□□ -1.4
PABPN1-204ENST00000554062 SEMA6CQ9H3T2 930 aa6.33□□□□□ -1.4
PABPN1-204ENST00000554062 NDOR1Q9UHB4 597 aa6.33□□□□□ -1.4
PABPN1-204ENST00000554062 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
PABPN1-204ENST00000554062 KRBA1A5PL33 1030 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 CAPNS1P04632 268 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 ENDOUP21128 410 aaKnown RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 IGFALSP35858 605 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 GFRA1P56159 465 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 ZNF445P59923 1031 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 POU4F1Q01851 419 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 CBX2Q14781 532 aaPredicted RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 DHCR24Q15392 516 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 YOD1Q5VVQ6 348 aaPredicted RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 ZNF385CQ66K41 422 aaPredicted RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 GTF2IRD2BQ6EKJ0 949 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 PAOXQ6QHF9 649 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 RSPO2Q6UXX9 243 aaPredicted RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 UBE2R2Q712K3 238 aaPredicted RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 GTF2IRD2Q86UP8 949 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 AFAP1L2Q8N4X5 818 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 BEND7Q8N7W2 519 aaPredicted RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 ADCY4Q8NFM4 1077 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 STAG1Q8WVM7 1258 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 BTN2A2Q8WVV5 523 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 DDX1Q92499 740 aaKnown RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 RELTQ969Z4 430 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 FAM46AQ96IP4 442 aaKnown RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 MAGEB10Q96LZ2 347 aaPredicted RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 TARS2Q9BW92 718 aaKnown RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 PRDM5Q9NQX1 630 aaPredicted RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 CYP26B1Q9NR63 512 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 GEMIN8Q9NWZ8 242 aaKnown RBP6.32□□□□□ -1.4
PABPN1-204ENST00000554062 GTF2IRD1Q9UHL9 959 aa6.32□□□□□ -1.4
PABPN1-204ENST00000554062 SIGLEC6O43699 453 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 OPA1O60313 960 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 WFS1O76024 890 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 SLITRK5O94991 958 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 GSNP06396 782 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
PABPN1-204ENST00000554062 GMPRP36959 345 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 KCNJ6P48051 423 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
PABPN1-204ENST00000554062 CNNM4Q6P4Q7 775 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 C22orf34Q6ZV56 151 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 DDX42Q86XP3 938 aaKnown RBP eCLIP6.31□□□□□ -1.4
PABPN1-204ENST00000554062 PIWIL2Q8TC59 973 aaKnown RBP6.31□□□□□ -1.4
PABPN1-204ENST00000554062 PANK1Q8TE04 598 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 DCAF4Q8WV16 495 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 JDP2Q8WYK2 163 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 MYRFLQ96LU7 910 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 PSMG3-AS1Q96PY0 264 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 NOL6Q9H6R4 1146 aaKnown RBP6.31□□□□□ -1.4
PABPN1-204ENST00000554062 TRIM39Q9HCM9 518 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 CHPF2Q9P2E5 772 aa6.31□□□□□ -1.4
PABPN1-204ENST00000554062 TRBV23OR9-2A0A075B6M9 112 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 FAM95CA0A1B0GW59 222 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 RXRBP28702 533 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 NOP2P46087 812 aaKnown RBP6.3□□□□□ -1.4
PABPN1-204ENST00000554062 EPHB1P54762 984 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 RGL3Q3MIN7 710 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 SFRP5Q5T4F7 317 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 ACBD5Q5T8D3 534 aaPredicted RBP6.3□□□□□ -1.4
PABPN1-204ENST00000554062 STYK1Q6J9G0 422 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 CDH24Q86UP0 819 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 AGGF1Q8N302 714 aaeCLIP6.3□□□□□ -1.4
PABPN1-204ENST00000554062 UTP4Q969X6 686 aaKnown RBP6.3□□□□□ -1.4
PABPN1-204ENST00000554062 PRDM14Q9GZV8 571 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 CHST7Q9NS84 486 aa6.3□□□□□ -1.4
PABPN1-204ENST00000554062 COL17A1Q9UMD9 1497 aaPredicted RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 DLX3O60479 287 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 DNAJC8O75937 253 aaPredicted RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 PARNO95453 639 aaKnown RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 NFICP08651 508 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 C6orf222P0C671 652 aaPredicted RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 MAP4P27816 1152 aaKnown RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 CDKN1CP49918 316 aaPredicted RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 NEK4P51957 841 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 CYP27A1Q02318 531 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 NMIQ13287 307 aaPredicted RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 KCNAB2Q13303 367 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 RNF219Q5W0B1 726 aaPredicted RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 GPAT2Q6NUI2 795 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 TREML4Q6UXN2 200 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 DDX53Q86TM3 631 aaKnown RBP6.29□□□□□ -1.4
PABPN1-204ENST00000554062 KIF18BQ86Y91 864 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 OR2W6PQ8NHA6 318 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 ZDHHC15Q96MV8 337 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 SLC52A2Q9HAB3 445 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 GFOD1Q9NXC2 390 aa6.29□□□□□ -1.4
PABPN1-204ENST00000554062 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
PABPN1-204ENST00000554062 IGF2BP3O00425 579 aaKnown RBP eCLIP6.28□□□□□ -1.4
PABPN1-204ENST00000554062 DHX15O43143 795 aaKnown RBP6.28□□□□□ -1.4
PABPN1-204ENST00000554062 ZEB2O60315 1214 aa6.28□□□□□ -1.4
PABPN1-204ENST00000554062 ARHGEF15O94989 841 aa6.28□□□□□ -1.4
PABPN1-204ENST00000554062 GRIA2P42262 883 aa6.28□□□□□ -1.4
PABPN1-204ENST00000554062 SNRPNP63162 240 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms