RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 ZNF333Q96JL9 665 aa27.32■■□□□ 1.96
NEK9-203ENST00000553945 KAT14Q9H8E8 782 aa27.32■■□□□ 1.96
NEK9-203ENST00000553945 PTPREP23469 700 aa27.31■■□□□ 1.96
NEK9-203ENST00000553945 STAT3P40763 770 aa27.31■■□□□ 1.96
NEK9-203ENST00000553945 SOX10P56693 466 aa27.31■■□□□ 1.96
NEK9-203ENST00000553945 MORN1Q5T089 497 aa27.31■■□□□ 1.96
NEK9-203ENST00000553945 PNMA1Q8ND90 353 aa27.31■■□□□ 1.96
NEK9-203ENST00000553945 ANKS1AQ92625 1134 aa27.31■■□□□ 1.96
NEK9-203ENST00000553945 MROH8Q9H579 483 aa27.31■■□□□ 1.96
NEK9-203ENST00000553945 ZNF214Q9UL59 606 aaPredicted RBP27.31■■□□□ 1.96
NEK9-203ENST00000553945 SLC15A5A6NIM6 579 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 PLA2G6O60733 806 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 SLC25A27O95847 323 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 PDHBP11177 359 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 RIOX2Q8IUF8 465 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 CPXCR1Q8N123 301 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 PXYLP1Q8TE99 480 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 SLC38A10Q9HBR0 1119 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 GPCPD1Q9NPB8 672 aa27.3■■□□□ 1.96
NEK9-203ENST00000553945 FRMPD2Q68DX3 1309 aaPredicted RBP27.3■■□□□ 1.96
NEK9-203ENST00000553945 RGS2P41220 211 aa27.29■■□□□ 1.96
NEK9-203ENST00000553945 SLC4A3P48751 1232 aa27.29■■□□□ 1.96
NEK9-203ENST00000553945 IFIT1BQ5T764 474 aaKnown RBP27.29■■□□□ 1.96
NEK9-203ENST00000553945 TTBK2Q6IQ55 1244 aa27.29■■□□□ 1.96
NEK9-203ENST00000553945 USP6NLQ92738 828 aa27.29■■□□□ 1.96
NEK9-203ENST00000553945 TEX13BQ9BXU2 312 aa27.29■■□□□ 1.96
NEK9-203ENST00000553945 FDX1P10109 184 aa27.28■■□□□ 1.96
NEK9-203ENST00000553945 MAP2K5Q13163 448 aa27.28■■□□□ 1.96
NEK9-203ENST00000553945 RNF20Q5VTR2 975 aa27.28■■□□□ 1.96
NEK9-203ENST00000553945 SNRNP48Q6IEG0 339 aaKnown RBP27.28■■□□□ 1.96
NEK9-203ENST00000553945 CHST3Q7LGC8 479 aa27.28■■□□□ 1.96
NEK9-203ENST00000553945 RAVER2Q9HCJ3 691 aaKnown RBP27.28■■□□□ 1.96
NEK9-203ENST00000553945 PRR12Q9ULL5 1215 aa27.28■■□□□ 1.96
NEK9-203ENST00000553945 IFIT3O14879 490 aaKnown RBP27.27■■□□□ 1.96
NEK9-203ENST00000553945 STRNO43815 780 aa27.27■■□□□ 1.96
NEK9-203ENST00000553945 SLC16A2P36021 539 aa27.27■■□□□ 1.96
NEK9-203ENST00000553945 UBXN2AP68543 259 aa27.27■■□□□ 1.96
NEK9-203ENST00000553945 ZNF543Q08ER8 600 aa27.27■■□□□ 1.96
NEK9-203ENST00000553945 GRB14Q14449 540 aa27.27■■□□□ 1.96
NEK9-203ENST00000553945 SEC23AQ15436 765 aa27.27■■□□□ 1.96
NEK9-203ENST00000553945 MB21D2Q8IYB1 491 aaPredicted RBP27.27■■□□□ 1.96
NEK9-203ENST00000553945 ERICH2A1L162 156 aa27.26■■□□□ 1.95
NEK9-203ENST00000553945 INHAP05111 366 aa27.26■■□□□ 1.95
NEK9-203ENST00000553945 SNHG28P0DPA3 235 aa27.26■■□□□ 1.95
NEK9-203ENST00000553945 XRCC5P13010 732 aaKnown RBP27.26■■□□□ 1.95
NEK9-203ENST00000553945 COPB2P35606 906 aa27.26■■□□□ 1.95
NEK9-203ENST00000553945 SNAP25P60880 206 aa27.26■■□□□ 1.95
NEK9-203ENST00000553945 SART3Q15020 963 aaKnown RBP27.26■■□□□ 1.95
NEK9-203ENST00000553945 ATP2A1O14983 1001 aa27.25■■□□□ 1.95
NEK9-203ENST00000553945 SYDE2Q5VT97 1194 aa27.25■■□□□ 1.95
NEK9-203ENST00000553945 BTNL9Q6UXG8 535 aa27.25■■□□□ 1.95
NEK9-203ENST00000553945 APBA2Q99767 749 aa27.25■■□□□ 1.95
NEK9-203ENST00000553945 TMEM106CQ9BVX2 250 aa27.25■■□□□ 1.95
NEK9-203ENST00000553945 RIPK3Q9Y572 518 aa27.25■■□□□ 1.95
NEK9-203ENST00000553945 GOLGA8HP0CJ92 632 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 FCER1AP12319 257 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 ZKSCAN1P17029 563 aaPredicted RBP27.24■■□□□ 1.95
NEK9-203ENST00000553945 ADORA2AP29274 412 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 OAZ1P54368 228 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 ANTXR2P58335 489 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 WTAPQ15007 396 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 MTFR1Q15390 333 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 TMEM67Q5HYA8 995 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 CCDC174Q6PII3 467 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 DPP9Q86TI2 863 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 TRIB2Q92519 343 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 MMP19Q99542 508 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 ZNF236Q9UL36 1845 aa27.24■■□□□ 1.95
NEK9-203ENST00000553945 HMGCRP04035 888 aa27.23■■□□□ 1.95
NEK9-203ENST00000553945 CCL14Q16627 93 aa27.23■■□□□ 1.95
NEK9-203ENST00000553945 GPATCH4Q5T3I0 446 aaKnown RBP27.23■■□□□ 1.95
NEK9-203ENST00000553945 TRMT44Q8IYL2 757 aaKnown RBP27.23■■□□□ 1.95
NEK9-203ENST00000553945 ABRAQ8N0Z2 381 aa27.23■■□□□ 1.95
NEK9-203ENST00000553945 PRC1O43663 620 aa27.22■■□□□ 1.95
NEK9-203ENST00000553945 REC8O95072 547 aa27.22■■□□□ 1.95
NEK9-203ENST00000553945 CCL5P13501 91 aa27.22■■□□□ 1.95
NEK9-203ENST00000553945 MCM5P33992 734 aa27.22■■□□□ 1.95
NEK9-203ENST00000553945 AGBL1Q96MI9 1066 aa27.22■■□□□ 1.95
NEK9-203ENST00000553945 POTEFA5A3E0 1075 aa27.21■■□□□ 1.95
NEK9-203ENST00000553945 HOXC6P09630 235 aa27.21■■□□□ 1.95
NEK9-203ENST00000553945 TRIM32Q13049 653 aa27.21■■□□□ 1.95
NEK9-203ENST00000553945 KCTD2Q14681 263 aa27.21■■□□□ 1.95
NEK9-203ENST00000553945 ASPRV1Q53RT3 343 aa27.21■■□□□ 1.95
NEK9-203ENST00000553945 NPLOC4Q8TAT6 608 aa27.21■■□□□ 1.95
NEK9-203ENST00000553945 SENP2Q9HC62 589 aa27.21■■□□□ 1.95
NEK9-203ENST00000553945 BRCA2P51587 3418 aa27.21■■□□□ 1.95
NEK9-203ENST00000553945 ZNF536O15090 1300 aa27.2■■□□□ 1.95
NEK9-203ENST00000553945 PARP1P09874 1014 aaKnown RBP27.2■■□□□ 1.94
NEK9-203ENST00000553945 RASEFQ8IZ41 740 aa27.2■■□□□ 1.94
NEK9-203ENST00000553945 IGDCC4Q8TDY8 1250 aa27.2■■□□□ 1.94
NEK9-203ENST00000553945 UBA5Q9GZZ9 404 aa27.2■■□□□ 1.94
NEK9-203ENST00000553945 RNF208Q9H0X6 261 aa27.2■■□□□ 1.94
NEK9-203ENST00000553945 UNC93B1Q9H1C4 597 aa27.2■■□□□ 1.94
NEK9-203ENST00000553945 RANBP17Q9H2T7 1088 aaKnown RBP27.2■■□□□ 1.94
NEK9-203ENST00000553945 HOMER2Q9NSB8 354 aa27.2■■□□□ 1.94
NEK9-203ENST00000553945 ZNFX1Q9P2E3 1918 aaKnown RBP27.2■■□□□ 1.94
NEK9-203ENST00000553945 RBBP6Q7Z6E9 1792 aaKnown RBP27.2■■□□□ 1.94
NEK9-203ENST00000553945 COBLO75128 1261 aa27.19■■□□□ 1.94
NEK9-203ENST00000553945 COL9A3Q14050 684 aaPredicted RBP27.19■■□□□ 1.94
NEK9-203ENST00000553945 CPVLQ9H3G5 476 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms