RNA–Protein interactions for RNA: ENST00000553772.5

COCH-206, Transcript of cochlin, humanhuman

TSL 4

Gene COCH, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-206ENST00000553772 HOXD10P28358 340 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 MAPK4P31152 587 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 OAZ1P54368 228 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 PRMT2P55345 433 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 TROAPQ12815 778 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 TMEM132BQ14DG7 1078 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 BLOC1S2Q6QNY1 142 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 CATIPQ7Z7H3 387 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 FBXL16Q8N461 479 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 SHCBP1Q8NEM2 672 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 KIFC2Q96AC6 838 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 MAP3K14Q99558 947 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 TRIM17Q9Y577 477 aa23.33■■□□□ 1.33
COCH-206ENST00000553772 PEX10O60683 326 aa23.32■■□□□ 1.32
COCH-206ENST00000553772 DDAH1O94760 285 aa23.32■■□□□ 1.32
COCH-206ENST00000553772 FMNL1O95466 1100 aaPredicted RBP23.32■■□□□ 1.32
COCH-206ENST00000553772 PARP1P09874 1014 aaKnown RBP23.32■■□□□ 1.32
COCH-206ENST00000553772 IKQ13123 557 aaPredicted RBP23.32■■□□□ 1.32
COCH-206ENST00000553772 SAMD1Q6SPF0 538 aaPredicted RBP23.32■■□□□ 1.32
COCH-206ENST00000553772 ZNF214Q9UL59 606 aaPredicted RBP23.32■■□□□ 1.32
COCH-206ENST00000553772 PRR12Q9ULL5 1215 aa23.32■■□□□ 1.32
COCH-206ENST00000553772 FRMPD2Q68DX3 1309 aaPredicted RBP23.32■■□□□ 1.32
COCH-206ENST00000553772 TNPO2O14787 897 aaKnown RBP23.31■■□□□ 1.32
COCH-206ENST00000553772 SLC25A27O95847 323 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 RPS6KB1P23443 525 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 COPB2P35606 906 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 COL13A1Q5TAT6 717 aaPredicted RBP23.31■■□□□ 1.32
COCH-206ENST00000553772 SYDE2Q5VT97 1194 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 TTBK2Q6IQ55 1244 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 CHMP4CQ96CF2 233 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 MOV10L1Q9BXT6 1211 aaKnown RBP23.31■■□□□ 1.32
COCH-206ENST00000553772 PORCNQ9H237 461 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 ZSWIM6Q9HCJ5 1215 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 GPCPD1Q9NPB8 672 aa23.31■■□□□ 1.32
COCH-206ENST00000553772 GPHNQ9NQX3 736 aaPredicted RBP23.31■■□□□ 1.32
COCH-206ENST00000553772 CCDC69A6NI79 296 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 CASTP20810 708 aaKnown RBP23.3■■□□□ 1.32
COCH-206ENST00000553772 STAT3P40763 770 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 GRM4Q14833 912 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 RIOX2Q8IUF8 465 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 CCAR1Q8IX12 1150 aaKnown RBP23.3■■□□□ 1.32
COCH-206ENST00000553772 ZNF654Q8IZM8 581 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 COA7Q96BR5 231 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 TEX13BQ9BXU2 312 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 LRRC2Q9BYS8 371 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 SRRDQ9UH36 339 aa23.3■■□□□ 1.32
COCH-206ENST00000553772 CTDP1Q9Y5B0 961 aaPredicted RBP23.3■■□□□ 1.32
COCH-206ENST00000553772 PALM3A6NDB9 673 aaPredicted RBP23.29■■□□□ 1.32
COCH-206ENST00000553772 CALM1P0DP23 149 aa23.29■■□□□ 1.32
COCH-206ENST00000553772 CALM2P0DP24 149 aa23.29■■□□□ 1.32
COCH-206ENST00000553772 CALM3P0DP25 149 aa23.29■■□□□ 1.32
COCH-206ENST00000553772 NFXL1Q6ZNB6 911 aa23.29■■□□□ 1.32
COCH-206ENST00000553772 RUFY3Q7L099 469 aa23.29■■□□□ 1.32
COCH-206ENST00000553772 AGXT2Q9BYV1 514 aa23.29■■□□□ 1.32
COCH-206ENST00000553772 RANBP17Q9H2T7 1088 aaKnown RBP23.29■■□□□ 1.32
COCH-206ENST00000553772 MROH8Q9H579 483 aa23.29■■□□□ 1.32
COCH-206ENST00000553772 MAD2L2Q9UI95 211 aa23.29■■□□□ 1.32
COCH-206ENST00000553772 GOLGA8HP0CJ92 632 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 SLC16A2P36021 539 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 PLS1Q14651 629 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 FBXO46Q6PJ61 603 aaPredicted RBP23.28■■□□□ 1.32
COCH-206ENST00000553772 GPR142Q7Z601 462 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 TCEANC2Q96MN5 208 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 PNMA2Q9UL42 364 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 PTPN22Q9Y2R2 807 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 SLC12A7Q9Y666 1083 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 CYP46A1Q9Y6A2 500 aa23.28■■□□□ 1.32
COCH-206ENST00000553772 PLXNB2O15031 1838 aa23.27■■□□□ 1.32
COCH-206ENST00000553772 ERCC3P19447 782 aa23.27■■□□□ 1.32
COCH-206ENST00000553772 RCAN1P53805 252 aa23.27■■□□□ 1.32
COCH-206ENST00000553772 PLEKHH3Q7Z736 793 aa23.27■■□□□ 1.32
COCH-206ENST00000553772 ZNF536O15090 1300 aa23.27■■□□□ 1.32
COCH-206ENST00000553772 MYH6P13533 1939 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 ZNFX1Q9P2E3 1918 aaKnown RBP23.26■■□□□ 1.31
COCH-206ENST00000553772 KLRF2D3W0D1 207 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 STRNO43815 780 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 CPA1P15085 419 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 KIF5BP33176 963 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 FGD1P98174 961 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 SNRNP48Q6IEG0 339 aaKnown RBP23.26■■□□□ 1.31
COCH-206ENST00000553772 STAG2Q8N3U4 1231 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 SOCS4Q8WXH5 440 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 GJD2Q9UKL4 321 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 ZNF236Q9UL36 1845 aa23.26■■□□□ 1.31
COCH-206ENST00000553772 SMARCA1P28370 1054 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 IRF5Q13568 498 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 TKFCQ3LXA3 575 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 APOA5Q6Q788 366 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 SYNE3Q6ZMZ3 975 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 Q6ZUG5 572 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.25■■□□□ 1.31
COCH-206ENST00000553772 NCAPG2Q86XI2 1143 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 ABRAQ8N0Z2 381 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 CPXCR1Q8N123 301 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 CTCFLQ8NI51 663 aaPredicted RBP23.25■■□□□ 1.31
COCH-206ENST00000553772 NUP133Q8WUM0 1156 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 MCOLN1Q9GZU1 580 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 UBA5Q9GZZ9 404 aa23.25■■□□□ 1.31
COCH-206ENST00000553772 RAVER2Q9HCJ3 691 aaKnown RBP23.25■■□□□ 1.31
COCH-206ENST00000553772 IVNS1ABPQ9Y6Y0 642 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms