RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 FRMPD2Q68DX3 1309 aaPredicted RBP13.92□□□□□ -0.18
TMEM253-202ENST00000553744 COL11A1P12107 1806 aaPredicted RBP13.92□□□□□ -0.18
TMEM253-202ENST00000553744 ERICH2A1L162 156 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
TMEM253-202ENST00000553744 ATP2A1O14983 1001 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 EPB41L2O43491 1005 aaKnown RBP13.92□□□□□ -0.18
TMEM253-202ENST00000553744 ZBED4O75132 1171 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 SLC25A27O95847 323 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 FDX1P10109 184 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 ERCC3P19447 782 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 SOX10P56693 466 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 TSGA10IPQ3SY00 556 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 SLC9C1Q4G0N8 1177 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 WDR78Q5VTH9 848 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 BTNL9Q6UXG8 535 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 CHST3Q7LGC8 479 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 RIOX2Q8IUF8 465 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 ARMC5Q96C12 935 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 NUDT12Q9BQG2 462 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 TEX13BQ9BXU2 312 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 CTDP1Q9Y5B0 961 aaPredicted RBP13.92□□□□□ -0.18
TMEM253-202ENST00000553744 PLXNB2O15031 1838 aa13.92□□□□□ -0.18
TMEM253-202ENST00000553744 PRC1O43663 620 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 ZKSCAN1P17029 563 aaPredicted RBP13.91□□□□□ -0.18
TMEM253-202ENST00000553744 PTPREP23469 700 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 GRK4P32298 578 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 MCM5P33992 734 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 HSPA4P34932 840 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 COPB2P35606 906 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 STAT3P40763 770 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 OAZ1P54368 228 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 COL9A3Q14050 684 aaPredicted RBP13.91□□□□□ -0.18
TMEM253-202ENST00000553744 GRB14Q14449 540 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 WTAPQ15007 396 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 TMEM67Q5HYA8 995 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 MORN1Q5T089 497 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 GPATCH4Q5T3I0 446 aaKnown RBP13.91□□□□□ -0.18
TMEM253-202ENST00000553744 TTBK2Q6IQ55 1244 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 NCAPG2Q86XI2 1143 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 RASEFQ8IZ41 740 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 SLAIN1Q8ND83 568 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 USP6NLQ92738 828 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 KCNB2Q92953 911 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 MTA3Q9BTC8 594 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 MROH8Q9H579 483 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 PRR12Q9ULL5 1215 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 IVNS1ABPQ9Y6Y0 642 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 ZNF236Q9UL36 1845 aa13.91□□□□□ -0.18
TMEM253-202ENST00000553744 SLC15A5A6NIM6 579 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 ADCY3O60266 1144 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 SLC16A2P36021 539 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 RGS2P41220 211 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 KRT32Q14532 448 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 ASPRV1Q53RT3 343 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 SNRNP48Q6IEG0 339 aaKnown RBP13.9□□□□□ -0.18
TMEM253-202ENST00000553744 NBPF11Q86T75 865 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 CPXCR1Q8N123 301 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 SH3TC2Q8TF17 1288 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 ZNF333Q96JL9 665 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 NEK1Q96PY6 1258 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 LY9Q9HBG7 655 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 SENP2Q9HC62 589 aa13.9□□□□□ -0.18
TMEM253-202ENST00000553744 RAVER2Q9HCJ3 691 aaKnown RBP13.9□□□□□ -0.18
TMEM253-202ENST00000553744 SH2B2O14492 632 aaPredicted RBP13.89□□□□□ -0.19
TMEM253-202ENST00000553744 STRNO43815 780 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 GOLGA8HP0CJ92 632 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 ELNP15502 786 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 MAP2K5Q13163 448 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 ADCK5Q3MIX3 580 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 APBA2Q99767 749 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 RANBP17Q9H2T7 1088 aaKnown RBP13.89□□□□□ -0.19
TMEM253-202ENST00000553744 ZNF536O15090 1300 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 WDR19Q8NEZ3 1342 aa13.89□□□□□ -0.19
TMEM253-202ENST00000553744 DOCK3Q8IZD9 2030 aa13.88□□□□□ -0.19
TMEM253-202ENST00000553744 PARP1P09874 1014 aaKnown RBP13.88□□□□□ -0.19
TMEM253-202ENST00000553744 XRCC5P13010 732 aaKnown RBP13.88□□□□□ -0.19
TMEM253-202ENST00000553744 CYP2B6P20813 491 aa13.88□□□□□ -0.19
TMEM253-202ENST00000553744 ADORA2AP29274 412 aa13.88□□□□□ -0.19
TMEM253-202ENST00000553744 ABRAQ8N0Z2 381 aa13.88□□□□□ -0.19
TMEM253-202ENST00000553744 USP26Q9BXU7 913 aa13.88□□□□□ -0.19
TMEM253-202ENST00000553744 GPHNQ9NQX3 736 aaPredicted RBP13.88□□□□□ -0.19
TMEM253-202ENST00000553744 RIPK3Q9Y572 518 aa13.88□□□□□ -0.19
TMEM253-202ENST00000553744 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
TMEM253-202ENST00000553744 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
TMEM253-202ENST00000553744 HOXC6P09630 235 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 FCER1AP12319 257 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 LIFRP42702 1097 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 SNAP25P60880 206 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 UBXN2AP68543 259 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 TROAPQ12815 778 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 CCDC174Q6PII3 467 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.87□□□□□ -0.19
TMEM253-202ENST00000553744 CATIPQ7Z7H3 387 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 TRMT44Q8IYL2 757 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms