RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 CHURC1Q8WUH1 139 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 FBXO28Q9NVF7 368 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 FEM1BQ9UK73 627 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 CTDP1Q9Y5B0 961 aaPredicted RBP11.31□□□□□ -0.6
CHD8-204ENST00000553622 STK36Q9NRP7 1315 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 A0A0G2JLL6 359 aaPredicted RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 H3BQV1 296 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 CYTH3O43739 400 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 DEXIO95424 95 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 TRIM29Q14134 588 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 TREML2Q5T2D2 321 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 FOXD4L5Q5VV16 416 aaPredicted RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 LARP1BQ659C4 914 aaKnown RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 FASTKD5Q7L8L6 764 aaKnown RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 HEATR3Q7Z4Q2 680 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 PRRT2Q7Z6L0 340 aaPredicted RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 SAPCD2Q86UD0 394 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 RASAL3Q86YV0 1011 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 FOXD4L4Q8WXT5 416 aaPredicted RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 WASF1Q92558 559 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 AIFM3Q96NN9 605 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 PIGSQ96S52 555 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 SLF1Q9BQI6 1058 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 RNF26Q9BY78 433 aaPredicted RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 PRR12Q9ULL5 1215 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
CHD8-204ENST00000553622 RBBP6Q7Z6E9 1792 aaKnown RBP11.3□□□□□ -0.6
CHD8-204ENST00000553622 CCL15-CCL14A0A0B4J2E2 113 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 VPS37CA5D8V6 355 aaPredicted RBP11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L15C9J2P7 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L13C9JLJ4 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L11C9JVI0 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L18D6R9N7 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L22D6RA61 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L17D6RBQ6 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L19D6RCP7 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L20D6RJB6 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 CETPP11597 493 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 FDPSP14324 419 aaKnown RBP11.29□□□□□ -0.6
CHD8-204ENST00000553622 PDCP20941 246 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 GTF2A2P52657 109 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
CHD8-204ENST00000553622 GUCY1B3Q02153 619 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 USP17L24Q0WX57 530 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 FUT2Q10981 343 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
CHD8-204ENST00000553622 CCL15Q16663 113 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 CCDC174Q6PII3 467 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
CHD8-204ENST00000553622 C8orf76Q96K31 380 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 JMJD4Q9H9V9 463 aa11.29□□□□□ -0.6
CHD8-204ENST00000553622 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
CHD8-204ENST00000553622 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
CHD8-204ENST00000553622 SCG2P13521 617 aa11.28□□□□□ -0.6
CHD8-204ENST00000553622 XBP1P17861 261 aa11.28□□□□□ -0.6
CHD8-204ENST00000553622 SMARCA1P28370 1054 aa11.28□□□□□ -0.6
CHD8-204ENST00000553622 PFKFB3Q16875 520 aaPredicted RBP11.28□□□□□ -0.6
CHD8-204ENST00000553622 QRICH1Q2TAL8 776 aa11.28□□□□□ -0.6
CHD8-204ENST00000553622 BTNL9Q6UXG8 535 aa11.28□□□□□ -0.6
CHD8-204ENST00000553622 PRPF38AQ8NAV1 312 aaKnown RBP11.28□□□□□ -0.6
CHD8-204ENST00000553622 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
CHD8-204ENST00000553622 RIOX1Q9H6W3 641 aa11.28□□□□□ -0.6
CHD8-204ENST00000553622 VPS54Q9P1Q0 977 aa11.28□□□□□ -0.6
CHD8-204ENST00000553622 AGTPBP1Q9UPW5 1226 aa11.28□□□□□ -0.6
CHD8-204ENST00000553622 ZNFX1Q9P2E3 1918 aaKnown RBP11.27□□□□□ -0.6
CHD8-204ENST00000553622 PNMA6FA0A0J9YX94 578 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 ZBTB5O15062 677 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 ZBED4O75132 1171 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 SLC10A3P09131 477 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 SYT1P21579 422 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 OSBPP22059 807 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 APLP1P51693 650 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 NAPAP54920 295 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 PABPC4Q13310 644 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHD8-204ENST00000553622 COG2Q14746 738 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 PKN1Q16512 942 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 USH1GQ495M9 461 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 MCTP1Q6DN14 999 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 OTUD7BQ6GQQ9 843 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 CATSPERGQ6ZRH7 1159 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 CPXCR1Q8N123 301 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 ATG4CQ96DT6 458 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 GJB4Q9NTQ9 266 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 PPP1R9AQ9ULJ8 1098 aa11.27□□□□□ -0.61
CHD8-204ENST00000553622 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 STX6O43752 255 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 PLA2G6O60733 806 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms