RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 BARHL2Q9NY43 387 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 SEC63Q9UGP8 760 aaKnown RBP15.85■□□□□ 0.13
APEX1-205ENST00000553555 SNCAIPQ9Y6H5 919 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 ZHX2Q9Y6X8 837 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 SMCHD1A6NHR9 2005 aa15.84■□□□□ 0.13
APEX1-205ENST00000553555 PNMA6FA0A0J9YX94 578 aa15.84■□□□□ 0.13
APEX1-205ENST00000553555 PLA2G6O60733 806 aa15.84■□□□□ 0.13
APEX1-205ENST00000553555 USP14P54578 494 aa15.84■□□□□ 0.13
APEX1-205ENST00000553555 BACE1P56817 501 aa15.84■□□□□ 0.13
APEX1-205ENST00000553555 VGLL4Q14135 290 aa15.84■□□□□ 0.13
APEX1-205ENST00000553555 LDHDQ86WU2 507 aa15.84■□□□□ 0.13
APEX1-205ENST00000553555 DIS3L2Q8IYB7 885 aaKnown RBP15.84■□□□□ 0.13
APEX1-205ENST00000553555 FAM177A1Q8N128 213 aaPredicted RBP15.84■□□□□ 0.13
APEX1-205ENST00000553555 BTBD18B2RXH4 712 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 GOLGA6L22H0YM25 854 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 hCG_1984214I3L0E3 225 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 STXBP3O00186 592 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 NLRP5P59047 1200 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 NPY5RQ15761 445 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 SYDE2Q5VT97 1194 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 TYW1BQ6NUM6 668 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 HEATR3Q7Z4Q2 680 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 ZNF713Q8N859 430 aaPredicted RBP15.83■□□□□ 0.13
APEX1-205ENST00000553555 CHURC1Q8WUH1 139 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 LPAR1Q92633 364 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 FOXP1Q9H334 677 aaPredicted RBP15.83■□□□□ 0.13
APEX1-205ENST00000553555 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 CNPY2Q9Y2B0 182 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 AFG3L2Q9Y4W6 797 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 CSADQ9Y600 493 aa15.83■□□□□ 0.13
APEX1-205ENST00000553555 PARP14Q460N5 1801 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 DDX11L8A8MPP1 907 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 C19orf81C9J6K1 198 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 ZBTB5O15062 677 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 WDR46O15213 610 aaKnown RBP15.83■□□□□ 0.12
APEX1-205ENST00000553555 STAT2P52630 851 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 IKQ13123 557 aaPredicted RBP15.83■□□□□ 0.12
APEX1-205ENST00000553555 MTMR2Q13614 643 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 GNL2Q13823 731 aaKnown RBP15.83■□□□□ 0.12
APEX1-205ENST00000553555 TTLL12Q14166 644 aaPredicted RBP15.83■□□□□ 0.12
APEX1-205ENST00000553555 MOB2Q70IA6 237 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 ARMC9Q7Z3E5 817 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 ANKRD13AQ8IZ07 590 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 CCDC148Q8NFR7 591 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 FEM1BQ9UK73 627 aa15.83■□□□□ 0.12
APEX1-205ENST00000553555 TRAF5O00463 557 aa15.82■□□□□ 0.12
APEX1-205ENST00000553555 CALML3P27482 149 aa15.82■□□□□ 0.12
APEX1-205ENST00000553555 KRT2P35908 639 aa15.82■□□□□ 0.12
APEX1-205ENST00000553555 KRT85P78386 507 aa15.82■□□□□ 0.12
APEX1-205ENST00000553555 ATL3Q6DD88 541 aa15.82■□□□□ 0.12
APEX1-205ENST00000553555 FAM160B2Q86V87 743 aa15.82■□□□□ 0.12
APEX1-205ENST00000553555 OXER1Q8TDS5 423 aa15.82■□□□□ 0.12
APEX1-205ENST00000553555 ZNF526Q8TF50 670 aaPredicted RBP15.82■□□□□ 0.12
APEX1-205ENST00000553555 TFIP11Q9UBB9 837 aaKnown RBP15.82■□□□□ 0.12
APEX1-205ENST00000553555 PRR12Q9ULL5 1215 aa15.82■□□□□ 0.12
APEX1-205ENST00000553555 TRIM75PA6NK02 468 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 PPP1R11O60927 126 aaPredicted RBP15.81■□□□□ 0.12
APEX1-205ENST00000553555 NCLP19338 710 aaKnown RBP15.81■□□□□ 0.12
APEX1-205ENST00000553555 NAPAP54920 295 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 FMR1Q06787 632 aaKnown RBP eCLIP15.81■□□□□ 0.12
APEX1-205ENST00000553555 NR5A1Q13285 461 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 DGKZQ13574 1117 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 CDC37Q16543 378 aaPredicted RBP15.81■□□□□ 0.12
APEX1-205ENST00000553555 QRICH1Q2TAL8 776 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 MYSM1Q5VVJ2 828 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 GALNT17Q6IS24 598 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 NOSTRINQ8IVI9 506 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 CCDC12Q8WUD4 166 aaPredicted RBP15.81■□□□□ 0.12
APEX1-205ENST00000553555 COA7Q96BR5 231 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 C12orf42Q96LP6 360 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 ZNF396Q96N95 335 aaPredicted RBP15.81■□□□□ 0.12
APEX1-205ENST00000553555 BRMS1Q9HCU9 246 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 TRPM7Q96QT4 1865 aa15.81■□□□□ 0.12
APEX1-205ENST00000553555 RLFQ13129 1914 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 PRPF40AO75400 957 aaKnown RBP15.8■□□□□ 0.12
APEX1-205ENST00000553555 PTMSP20962 102 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 BLIDQ8IZY5 108 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 DAGLBQ8NCG7 672 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 ZMYND12Q9H0C1 365 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 ELP3Q9H9T3 547 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 GDPD2Q9HCC8 539 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 LMBRD1Q9NUN5 540 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 CFAP45Q9UL16 551 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 PCDHA4Q9UN74 947 aa15.8■□□□□ 0.12
APEX1-205ENST00000553555 ESYT2A0FGR8 921 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 SMCO2A6NFE2 343 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 VCAM1P19320 739 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 PPATQ06203 517 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 SH3D19Q5HYK7 790 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 LDLRAD1Q5T700 205 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 RBM46Q8TBY0 533 aaKnown RBP15.79■□□□□ 0.12
APEX1-205ENST00000553555 TNFRSF25Q93038 417 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.79■□□□□ 0.12
APEX1-205ENST00000553555 UNCXA6NJT0 531 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 ADAMTS3O15072 1205 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 FIBPO43427 364 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 HMGCS2P54868 508 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 SNAP25P60880 206 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms