RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
ATXN3-220ENST00000553491 CDK5R2Q13319 367 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 CNGB1Q14028 1251 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-220ENST00000553491 NAALADL2Q58DX5 795 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 UBE3DQ7Z6J8 389 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 RSRP1Q9BUV0 290 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 CCSER2Q9H7U1 834 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 PIDD1Q9HB75 910 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 KBTBD4Q9NVX7 518 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 TERF2IPQ9NYB0 399 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 KTN1Q86UP2 1357 aaKnown RBP6.41□□□□□ -1.38
ATXN3-220ENST00000553491 LRP6O75581 1613 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 ALS2Q96Q42 1657 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 DCDC2CA8MYV0 355 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 CYP26A1O43174 497 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 PRNPP04156 253 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 HNRNPUQ00839 825 aaKnown RBP eCLIP6.4□□□□□ -1.38
ATXN3-220ENST00000553491 CYP27A1Q02318 531 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 INPP5AQ14642 412 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 CHRNA2Q15822 529 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 MAP3K11Q16584 847 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 PPM1JQ5JR12 505 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 TTBK2Q6IQ55 1244 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 C12orf40Q86WS4 652 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 ZNF654Q8IZM8 581 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 ACSBG1Q96GR2 724 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 RGS17Q9UGC6 210 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-220ENST00000553491 ZC3H7BQ9UGR2 993 aaKnown RBP6.4□□□□□ -1.38
ATXN3-220ENST00000553491 CSADQ9Y600 493 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 U3KQE9 123 aa6.4□□□□□ -1.38
ATXN3-220ENST00000553491 ARHGEF10O15013 1369 aa6.4□□□□□ -1.39
ATXN3-220ENST00000553491 ATP7BP35670 1465 aa6.4□□□□□ -1.39
ATXN3-220ENST00000553491 COL22A1Q8NFW1 1626 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-220ENST00000553491 ABCA3Q99758 1704 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 LTN1O94822 1766 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 FAM83GA6ND36 823 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 RNGTTO60942 597 aaKnown RBP6.39□□□□□ -1.39
ATXN3-220ENST00000553491 IGSF3O75054 1194 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 LEFTY1O75610 366 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 TNNI2P48788 182 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 CDK8P49336 464 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 GP2P55259 537 aaKnown RBP6.39□□□□□ -1.39
ATXN3-220ENST00000553491 RPS26P62854 115 aaKnown RBP6.39□□□□□ -1.39
ATXN3-220ENST00000553491 ZBTB37Q5TC79 503 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 LRFN4Q6PJG9 635 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-220ENST00000553491 AGMOQ6ZNB7 445 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 CYFIP1Q7L576 1253 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 DUSP23Q9BVJ7 150 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 PCDHA4Q9UN74 947 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 PCDHB5Q9Y5E4 795 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 OAS3Q9Y6K5 1087 aaKnown RBP6.39□□□□□ -1.39
ATXN3-220ENST00000553491 SBNO1A3KN83 1393 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 TNS3Q68CZ2 1445 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 PLCH1Q4KWH8 1693 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 BRWD3Q6RI45 1802 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 KIF20BQ96Q89 1820 aa6.39□□□□□ -1.39
ATXN3-220ENST00000553491 MINDY4BA8MYZ0 360 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 FAM87AP0C7U9 286 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 RELL1Q8IUW5 271 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 TMEM74Q96NL1 305 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 TESK2Q96S53 571 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 BTG4Q9NY30 223 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 USP35Q9P2H5 1018 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 TLR6Q9Y2C9 796 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 TTC21BQ7Z4L5 1316 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 MON2Q7Z3U7 1717 aa6.38□□□□□ -1.39
ATXN3-220ENST00000553491 PHRF1Q9P1Y6 1649 aaKnown RBP6.37□□□□□ -1.39
ATXN3-220ENST00000553491 FANCGO15287 622 aa6.37□□□□□ -1.39
ATXN3-220ENST00000553491 WNT11O96014 354 aa6.37□□□□□ -1.39
ATXN3-220ENST00000553491 RLBP1P12271 317 aa6.37□□□□□ -1.39
ATXN3-220ENST00000553491 GBP2P32456 591 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-220ENST00000553491 LIG3P49916 1009 aa6.37□□□□□ -1.39
ATXN3-220ENST00000553491 NME9Q86XW9 330 aa6.37□□□□□ -1.39
ATXN3-220ENST00000553491 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
ATXN3-220ENST00000553491 PHC3Q8NDX5 983 aa6.37□□□□□ -1.39
ATXN3-220ENST00000553491 ADAMTS1Q9UHI8 967 aa6.37□□□□□ -1.39
ATXN3-220ENST00000553491 TRPC5Q9UL62 973 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-220ENST00000553491 RGPD2P0DJD1 1756 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 COL14A1Q05707 1796 aaKnown RBP6.36□□□□□ -1.39
ATXN3-220ENST00000553491 POLR3AO14802 1390 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-220ENST00000553491 GFRA2O00451 464 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 GCP02774 474 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 TFE3P19532 575 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-220ENST00000553491 RBM6P78332 1123 aaKnown RBP6.36□□□□□ -1.39
ATXN3-220ENST00000553491 PWP1Q13610 501 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 CYP27C1Q4G0S4 372 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 UNC5CLQ8IV45 518 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 LTV1Q96GA3 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-220ENST00000553491 PLPPR2Q96GM1 343 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 RHOVQ96L33 236 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 KRTAP4-12Q9BQ66 201 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms