RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 PLA2G6O60733 806 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 MAPK4P31152 587 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 MCM5P33992 734 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 SLC16A2P36021 539 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 ZNF543Q08ER8 600 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 WTAPQ15007 396 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
PTCH1-226ENST00000553011 GPR142Q7Z601 462 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 PLEKHH3Q7Z736 793 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 IGDCC4Q8TDY8 1250 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 ABHD8Q96I13 439 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 LRRC2Q9BYS8 371 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 ZNF214Q9UL59 606 aaPredicted RBP16.54■□□□□ 0.24
PTCH1-226ENST00000553011 PRR12Q9ULL5 1215 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 HPS5Q9UPZ3 1129 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 SNX14Q9Y5W7 946 aa16.54■□□□□ 0.24
PTCH1-226ENST00000553011 ZBED4O75132 1171 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 ERCC3P19447 782 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 STAT3P40763 770 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 FLT3LGP49771 235 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 PRMT2P55345 433 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 SNAP25P60880 206 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 CPXCR1Q8N123 301 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 TCEANC2Q96MN5 208 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 NEK1Q96PY6 1258 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 SLC38A10Q9HBR0 1119 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 CWC22Q9HCG8 908 aaKnown RBP16.53■□□□□ 0.24
PTCH1-226ENST00000553011 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
PTCH1-226ENST00000553011 PLXNA1Q9UIW2 1896 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.24
PTCH1-226ENST00000553011 EPB41L2O43491 1005 aaKnown RBP16.52■□□□□ 0.24
PTCH1-226ENST00000553011 KRT32Q14532 448 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 SYDE2Q5VT97 1194 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 SNRNP48Q6IEG0 339 aaKnown RBP16.52■□□□□ 0.24
PTCH1-226ENST00000553011 BTNL9Q6UXG8 535 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 NCAPG2Q86XI2 1143 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 SHCBP1Q8NEM2 672 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 RAET1EQ8TD07 263 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
PTCH1-226ENST00000553011 RAVER2Q9HCJ3 691 aaKnown RBP16.52■□□□□ 0.24
PTCH1-226ENST00000553011 CTDP1Q9Y5B0 961 aaPredicted RBP16.52■□□□□ 0.24
PTCH1-226ENST00000553011 CPA1P15085 419 aa16.51■□□□□ 0.23
PTCH1-226ENST00000553011 SLC4A3P48751 1232 aa16.51■□□□□ 0.23
PTCH1-226ENST00000553011 GPATCH4Q5T3I0 446 aaKnown RBP16.51■□□□□ 0.23
PTCH1-226ENST00000553011 RIOX2Q8IUF8 465 aa16.51■□□□□ 0.23
PTCH1-226ENST00000553011 TMEM87BQ96K49 555 aa16.51■□□□□ 0.23
PTCH1-226ENST00000553011 JAKMIP1Q96N16 626 aaKnown RBP16.51■□□□□ 0.23
PTCH1-226ENST00000553011 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
PTCH1-226ENST00000553011 TEX13BQ9BXU2 312 aa16.51■□□□□ 0.23
PTCH1-226ENST00000553011 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
PTCH1-226ENST00000553011 ZNF236Q9UL36 1845 aa16.51■□□□□ 0.23
PTCH1-226ENST00000553011 ZNF536O15090 1300 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 ATP2A1O14983 1001 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 SLC25A27O95847 323 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 PARP1P09874 1014 aaKnown RBP16.5■□□□□ 0.23
PTCH1-226ENST00000553011 FDX1P10109 184 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 PTPREP23469 700 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
PTCH1-226ENST00000553011 IRF5Q13568 498 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 ASPRV1Q53RT3 343 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 MORN1Q5T089 497 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
PTCH1-226ENST00000553011 STAG2Q8N3U4 1231 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 NUDT12Q9BQG2 462 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 MYL10Q9BUA6 226 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 MROH8Q9H579 483 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 RIPK3Q9Y572 518 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 IVNS1ABPQ9Y6Y0 642 aa16.5■□□□□ 0.23
PTCH1-226ENST00000553011 SLC15A5A6NIM6 579 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 ADCY3O60266 1144 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 SEC24BO95487 1268 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 ELNP15502 786 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 TAL1P17542 331 aaPredicted RBP16.49■□□□□ 0.23
PTCH1-226ENST00000553011 CYP2B6P20813 491 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 TROAPQ12815 778 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 GRB14Q14449 540 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 GRM4Q14833 912 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 SLC9C1Q4G0N8 1177 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 SOCS4Q8WXH5 440 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 USP6NLQ92738 828 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 AGBL1Q96MI9 1066 aa16.49■□□□□ 0.23
PTCH1-226ENST00000553011 RANBP17Q9H2T7 1088 aaKnown RBP16.49■□□□□ 0.23
PTCH1-226ENST00000553011 WDR19Q8NEZ3 1342 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 MCM3APO60318 1980 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 GRK4P32298 578 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 OAZ1P54368 228 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 MAP2K5Q13163 448 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 NUP133Q8WUM0 1156 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 MAD2L2Q9UI95 211 aa16.48■□□□□ 0.23
PTCH1-226ENST00000553011 PALM3A6NDB9 673 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-226ENST00000553011 CCDC69A6NI79 296 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms