RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ISY1Q9ULR0 285 aaKnown RBP13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 PTCH2Q9Y6C5 1203 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 MCM3APO60318 1980 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 ERICH2A1L162 156 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 ECM2O94769 699 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 MCM5P33992 734 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 HSPA4P34932 840 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 COPB2P35606 906 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 ZNF543Q08ER8 600 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 IKQ13123 557 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 IRF5Q13568 498 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 TMEM132BQ14DG7 1078 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 Q3C1V9 767 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 GPATCH4Q5T3I0 446 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 KCTD1Q719H9 257 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 GPR142Q7Z601 462 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 CCAR1Q8IX12 1150 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 KCNB2Q92953 911 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 KIFC2Q96AC6 838 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 ABHD8Q96I13 439 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 MOV10L1Q9BXT6 1211 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 SLC38A10Q9HBR0 1119 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 HPS5Q9UPZ3 1129 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 MTMR7Q9Y216 660 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 BAZ2BQ9UIF8 2168 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 LRRC37A2A6NM11 1700 aa13.73□□□□□ -0.21
TRAFD1-209ENST00000552896 IFIT3O14879 490 aaKnown RBP13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 PRC1O43663 620 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 SLC25A27O95847 323 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 OAZ1P54368 228 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 PLS1Q14651 629 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 WTAPQ15007 396 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 ASPRV1Q53RT3 343 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 BTNL9Q6UXG8 535 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 PLEKHH3Q7Z736 793 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 RAET1EQ8TD07 263 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 TEX13BQ9BXU2 312 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 MROH8Q9H579 483 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 GABRQQ9UN88 632 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 IVNS1ABPQ9Y6Y0 642 aa13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 KIAA0100Q14667 2235 aaKnown RBP13.72□□□□□ -0.21
TRAFD1-209ENST00000552896 FRMPD2Q68DX3 1309 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 BRCA2P51587 3418 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 ZBED4O75132 1171 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 FLT3LGP49771 235 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 GRB14Q14449 540 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 SLC9C1Q4G0N8 1177 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 TMEM67Q5HYA8 995 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 MORN1Q5T089 497 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 RIOX2Q8IUF8 465 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 RASEFQ8IZ41 740 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 SLAIN1Q8ND83 568 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 ARMC5Q96C12 935 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 LY9Q9HBG7 655 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 CWC22Q9HCG8 908 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 PRR12Q9ULL5 1215 aa13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 CTDP1Q9Y5B0 961 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-209ENST00000552896 SLC15A5A6NIM6 579 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 HMGB1P09429 215 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 ERCC3P19447 782 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 STAT3P40763 770 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 SYDE2Q5VT97 1194 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 SNRNP48Q6IEG0 339 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 CHST3Q7LGC8 479 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 ABRAQ8N0Z2 381 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 IGDCC4Q8TDY8 1250 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 PXYLP1Q8TE99 480 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 USP6NLQ92738 828 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 CHMP4CQ96CF2 233 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 NEK1Q96PY6 1258 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 APBA2Q99767 749 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 NUDT12Q9BQG2 462 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 GJD2Q9UKL4 321 aa13.7□□□□□ -0.22
TRAFD1-209ENST00000552896 STRNO43815 780 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 DDAH1O94760 285 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 PARP1P09874 1014 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 PTPREP23469 700 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 GRK4P32298 578 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 RGS2P41220 211 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 LIFRP42702 1097 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 COL9A3Q14050 684 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 ADCK5Q3MIX3 580 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 WDR78Q5VTH9 848 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 TTBK2Q6IQ55 1244 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 NCAPG2Q86XI2 1143 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 GPCPD1Q9NPB8 672 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 SNX14Q9Y5W7 946 aa13.69□□□□□ -0.22
TRAFD1-209ENST00000552896 ZNF536O15090 1300 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 ADCY3O60266 1144 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 XRCC5P13010 732 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 SLC16A2P36021 539 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms