RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
SMARCC2-212ENST00000552566 NACAP1Q9BZK3 213 aa16.44■□□□□ 0.22
SMARCC2-212ENST00000552566 ADAMTS5Q9UNA0 930 aa16.44■□□□□ 0.22
SMARCC2-212ENST00000552566 CTDP1Q9Y5B0 961 aaPredicted RBP16.44■□□□□ 0.22
SMARCC2-212ENST00000552566 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
SMARCC2-212ENST00000552566 MCCP23508 829 aa16.43■□□□□ 0.22
SMARCC2-212ENST00000552566 TDHQ8IZJ6 230 aa16.43■□□□□ 0.22
SMARCC2-212ENST00000552566 ZNF287Q9HBT7 754 aa16.43■□□□□ 0.22
SMARCC2-212ENST00000552566 NYAP2Q9P242 653 aa16.43■□□□□ 0.22
SMARCC2-212ENST00000552566 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
SMARCC2-212ENST00000552566 ATP11BQ9Y2G3 1177 aa16.43■□□□□ 0.22
SMARCC2-212ENST00000552566 NDUFB10O96000 172 aa16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 RTP1P59025 263 aa16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 CCDC129Q6ZRS4 1044 aa16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 LBHD1Q9BQE6 289 aaPredicted RBP16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 PRKAG2Q9UGJ0 569 aa16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 ZNF214Q9UL59 606 aaPredicted RBP16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 CEP290O15078 2479 aa16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 TRIOBPQ9H2D6 2365 aa16.42■□□□□ 0.22
SMARCC2-212ENST00000552566 RANBP2P49792 3224 aaKnown RBP16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 MYH7P12883 1935 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 ROBO3Q96MS0 1386 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 EPB41L2O43491 1005 aaKnown RBP16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 ZBED4O75132 1171 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 CPXCR1Q8N123 301 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 LRRC47Q8N1G4 583 aaKnown RBP16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 REPS2Q8NFH8 660 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 FERMT2Q96AC1 680 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 KIFC2Q96AC6 838 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 NAPBQ9H115 298 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 CTNNA3Q9UI47 895 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 DOCK3Q8IZD9 2030 aa16.41■□□□□ 0.22
SMARCC2-212ENST00000552566 SLC3A2P08195 630 aaKnown RBP16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 TSPY3P0CV98 308 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 TSPY8P0CW00 308 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 COPB2P35606 906 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 ZNF792Q3KQV3 632 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 ZNF589Q86UQ0 364 aaPredicted RBP16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 PRPF38AQ8NAV1 312 aaKnown RBP16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 CHMP4CQ96CF2 233 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 CEP95Q96GE4 821 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 TINF2Q9BSI4 451 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 DSCC1Q9BVC3 393 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 TEX13BQ9BXU2 312 aa16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
SMARCC2-212ENST00000552566 IGKV6D-41A0A0C4DH26 115 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 TTLL1O95922 423 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 RARBP10826 455 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 TAL1P17542 331 aaPredicted RBP16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 TFAP4Q01664 338 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 PDE4BQ07343 736 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 LRRC41Q15345 812 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 RNF20Q5VTR2 975 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 SLC39A5Q6ZMH5 540 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 RAVER2Q9HCJ3 691 aaKnown RBP16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 XPNPEP3Q9NQH7 507 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 PRDM5Q9NQX1 630 aaPredicted RBP16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 MTMR4Q9NYA4 1195 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 CNPY2Q9Y2B0 182 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 RIPK3Q9Y572 518 aa16.39■□□□□ 0.21
SMARCC2-212ENST00000552566 PGK1P00558 417 aa16.38■□□□□ 0.21
SMARCC2-212ENST00000552566 PPARAQ07869 468 aa16.38■□□□□ 0.21
SMARCC2-212ENST00000552566 LRIT3Q3SXY7 679 aa16.38■□□□□ 0.21
SMARCC2-212ENST00000552566 TRIM60Q495X7 471 aa16.38■□□□□ 0.21
SMARCC2-212ENST00000552566 DEFB123Q8N688 67 aa16.38■□□□□ 0.21
SMARCC2-212ENST00000552566 NRBP1Q9UHY1 535 aa16.38■□□□□ 0.21
SMARCC2-212ENST00000552566 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
SMARCC2-212ENST00000552566 SEC24BO95487 1268 aa16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 IKQ13123 557 aaPredicted RBP16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 SLFN13Q68D06 897 aa16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 Q7L0L9 218 aa16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 NEDD1Q8NHV4 660 aa16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 MAP4K1Q92918 833 aa16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 MKL1Q969V6 931 aa16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 LENG1Q96BZ8 264 aaPredicted RBP16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 USP26Q9BXU7 913 aa16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 LSG1Q9H089 658 aaKnown RBP16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 FEM1BQ9UK73 627 aa16.37■□□□□ 0.21
SMARCC2-212ENST00000552566 BMP3P12645 472 aa16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 PTH1RQ03431 593 aa16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 IMMTQ16891 758 aaKnown RBP16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 RNF180Q86T96 592 aa16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 ANKRD35Q8N283 1001 aa16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 C22orf23Q9BZE7 217 aa16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 IL25Q9H293 177 aa16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 HOMER2Q9NSB8 354 aa16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 ZHX1Q9UKY1 873 aaPredicted RBP16.36■□□□□ 0.21
SMARCC2-212ENST00000552566 TSPY2A6NKD2 308 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 TMEM232C9JQI7 657 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 ZNF213O14771 459 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 ZNF865P0CJ78 1059 aaPredicted RBP16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 AKR1A1P14550 325 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 ALX1Q15699 326 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms