RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 ZNF827Q17R98 1081 aa6.64□□□□□ -1.35
USP44-207ENST00000552237 HSF5Q4G112 596 aaPredicted RBP6.64□□□□□ -1.35
USP44-207ENST00000552237 UBXN11Q5T124 520 aa6.64□□□□□ -1.35
USP44-207ENST00000552237 TMC3Q7Z5M5 1100 aa6.64□□□□□ -1.35
USP44-207ENST00000552237 PHC3Q8NDX5 983 aa6.64□□□□□ -1.35
USP44-207ENST00000552237 GATAD2BQ8WXI9 593 aa6.64□□□□□ -1.35
USP44-207ENST00000552237 NOC4LQ9BVI4 516 aaKnown RBP6.64□□□□□ -1.35
USP44-207ENST00000552237 MYRFQ9Y2G1 1151 aa6.64□□□□□ -1.35
USP44-207ENST00000552237 GPR55Q9Y2T6 319 aaPredicted RBP6.64□□□□□ -1.35
USP44-207ENST00000552237 PRICKLE3O43900 615 aaPredicted RBP6.63□□□□□ -1.35
USP44-207ENST00000552237 PFKLP17858 780 aa6.63□□□□□ -1.35
USP44-207ENST00000552237 ENDOUP21128 410 aaKnown RBP6.63□□□□□ -1.35
USP44-207ENST00000552237 BBS9Q3SYG4 887 aa6.63□□□□□ -1.35
USP44-207ENST00000552237 HHIPL2Q6UWX4 724 aa6.63□□□□□ -1.35
USP44-207ENST00000552237 NUP43Q8NFH3 380 aa6.63□□□□□ -1.35
USP44-207ENST00000552237 PCDHA5Q9Y5H7 936 aa6.63□□□□□ -1.35
USP44-207ENST00000552237 PRR36Q9H6K5 1346 aa6.62□□□□□ -1.35
USP44-207ENST00000552237 F6X3S4 739 aa6.62□□□□□ -1.35
USP44-207ENST00000552237 F13A1P00488 732 aa6.62□□□□□ -1.35
USP44-207ENST00000552237 RAG1P15918 1043 aa6.62□□□□□ -1.35
USP44-207ENST00000552237 LIMS1P48059 325 aa6.62□□□□□ -1.35
USP44-207ENST00000552237 SLURP1P55000 103 aa6.62□□□□□ -1.35
USP44-207ENST00000552237 CAMK2GQ13555 558 aaPredicted RBP6.62□□□□□ -1.35
USP44-207ENST00000552237 KIR3DS1Q14943 382 aa6.62□□□□□ -1.35
USP44-207ENST00000552237 TP53I13Q8NBR0 393 aaPredicted RBP6.62□□□□□ -1.35
USP44-207ENST00000552237 DUSP9Q99956 384 aaKnown RBP6.62□□□□□ -1.35
USP44-207ENST00000552237 CDADC1Q9BWV3 514 aa6.62□□□□□ -1.35
USP44-207ENST00000552237 A0A1W2PQ27 194 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 A0A1W2PQ64 194 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 A0A1W2PQC6 194 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 A0A1W2PQD8 194 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 FAM221AA4D161 298 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 FADS2P1A8MWK0 482 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 FFAR3O14843 346 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 RGS13O14921 159 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 PRAMEF1O95521 474 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 PDIA4P13667 645 aaKnown RBP6.61□□□□□ -1.35
USP44-207ENST00000552237 LMNB2Q03252 620 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 TAF1CQ15572 869 aaPredicted RBP6.61□□□□□ -1.35
USP44-207ENST00000552237 ZC3H14Q6PJT7 736 aaKnown RBP6.61□□□□□ -1.35
USP44-207ENST00000552237 VWCEQ96DN2 955 aa6.61□□□□□ -1.35
USP44-207ENST00000552237 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP44-207ENST00000552237 CNOT11Q9UKZ1 510 aaKnown RBP6.61□□□□□ -1.35
USP44-207ENST00000552237 PF4P02776 101 aa6.6□□□□□ -1.35
USP44-207ENST00000552237 ST13P50502 369 aaKnown RBP6.6□□□□□ -1.35
USP44-207ENST00000552237 ZNF200P98182 395 aaPredicted RBP6.6□□□□□ -1.35
USP44-207ENST00000552237 RPTNQ6XPR3 784 aa6.6□□□□□ -1.35
USP44-207ENST00000552237 EAF1Q96JC9 268 aaPredicted RBP6.6□□□□□ -1.35
USP44-207ENST00000552237 TRAIPQ9BWF2 469 aa6.6□□□□□ -1.35
USP44-207ENST00000552237 POLR3KQ9Y2Y1 108 aaPredicted RBP6.6□□□□□ -1.35
USP44-207ENST00000552237 MEIS1O00470 390 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 SIGLEC6O43699 453 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 DNAJA2O60884 412 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 SNW1Q13573 536 aaKnown RBP6.59□□□□□ -1.35
USP44-207ENST00000552237 NBPF9Q3BBW0 867 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 PLEKHN1Q494U1 663 aaPredicted RBP6.59□□□□□ -1.35
USP44-207ENST00000552237 ARSHQ5FYA8 562 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 SNAP47Q5SQN1 464 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 ZFYVE27Q5T4F4 411 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 NT5DC1Q5TFE4 455 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 LSRQ86X29 649 aaPredicted RBP6.59□□□□□ -1.35
USP44-207ENST00000552237 TNFRSF12AQ9NP84 129 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 IVNS1ABPQ9Y6Y0 642 aa6.59□□□□□ -1.35
USP44-207ENST00000552237 A0A1W2PQ45 241 aaPredicted RBP6.58□□□□□ -1.36
USP44-207ENST00000552237 A0A1W2PQY0 241 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 CAP1Q01518 475 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 NR1I3Q14994 352 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 TARBP2Q15633 366 aaKnown RBP6.58□□□□□ -1.36
USP44-207ENST00000552237 SLCO6A1Q86UG4 719 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 AEBP1Q8IUX7 1158 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 CHST7Q9NS84 486 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 RNF19AQ9NV58 838 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 ERVK13-1Q9NX77 482 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 IMPACTQ9P2X3 320 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 SUSD2Q9UGT4 822 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 FAN1Q9Y2M0 1017 aa6.58□□□□□ -1.36
USP44-207ENST00000552237 UBOX5O94941 541 aa6.57□□□□□ -1.36
USP44-207ENST00000552237 GBP2P32456 591 aaPredicted RBP6.57□□□□□ -1.36
USP44-207ENST00000552237 MAPKAPK2P49137 400 aa6.57□□□□□ -1.36
USP44-207ENST00000552237 RAD51AP2Q09MP3 1159 aa6.57□□□□□ -1.36
USP44-207ENST00000552237 PSMD2Q13200 908 aa6.57□□□□□ -1.36
USP44-207ENST00000552237 MPP2Q14168 576 aa6.57□□□□□ -1.36
USP44-207ENST00000552237 CBX2Q14781 532 aaPredicted RBP6.57□□□□□ -1.36
USP44-207ENST00000552237 NBPF12Q5TAG4 269 aaPredicted RBP6.57□□□□□ -1.36
USP44-207ENST00000552237 FERMT3Q86UX7 667 aa6.57□□□□□ -1.36
USP44-207ENST00000552237 A0A1W2PQJ5 194 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 SUV39H1O43463 412 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 MSL3P1P0C860 447 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 FAM160A1Q05DH4 1040 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 REC114Q7Z4M0 266 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 RELL1Q8IUW5 271 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 ADGRG2Q8IZP9 1017 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 NAT16Q8N8M0 369 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 SPATA25Q9BR10 227 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 PRDM14Q9GZV8 571 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 SRRDQ9UH36 339 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 ACSL6Q9UKU0 697 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 MINPP1Q9UNW1 487 aa6.56□□□□□ -1.36
USP44-207ENST00000552237 MAGEA10P43363 369 aaPredicted RBP6.55□□□□□ -1.36
USP44-207ENST00000552237 ZXDAP98168 799 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms