RNA–Protein interactions for RNA: ENST00000552187.1

TMEM106C-218, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-218ENST00000552187 ERCC3P19447 782 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 TTLL4Q14679 1199 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 BEND3Q5T5X7 828 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 CCSAPQ6IQ19 270 aaPredicted RBP9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 LBX2Q6XYB7 198 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 SUGP1Q8IWZ8 645 aaKnown RBP9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 SLF2Q8IX21 1173 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 FAM9BQ8IZU0 186 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 KLHDC9Q8NEP7 349 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 SUCLG2Q96I99 432 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 TMEM121BQ9BXQ6 578 aaPredicted RBP9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 UPF3BQ9BZI7 483 aaKnown RBP9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 ZBTB21Q9ULJ3 1066 aa9.88□□□□□ -0.83
TMEM106C-218ENST00000552187 MROH7-TTC4A0A0A0MT08 1334 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 COL4A4P53420 1690 aaPredicted RBP9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 VCAM1P19320 739 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 IRS1P35568 1242 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 RPUSD2Q8IZ73 545 aaKnown RBP9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 KLHDC4Q8TBB5 520 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 FAM163AQ96GL9 167 aaPredicted RBP9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 CDCA7LQ96GN5 454 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 C12orf42Q96LP6 360 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 CNTNAP3BQ96NU0 1288 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 CNTNAP3Q9BZ76 1288 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 WNT8AQ9H1J5 351 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 GNL3LQ9NVN8 582 aaKnown RBP9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 C9orf78Q9NZ63 289 aaPredicted RBP9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 LMCD1Q9NZU5 365 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 ABCF2Q9UG63 623 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 CEP250Q9BV73 2442 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 COL4A6Q14031 1691 aa9.87□□□□□ -0.83
TMEM106C-218ENST00000552187 TMEM221A6NGB7 291 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 M0R296 226 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 CD4P01730 458 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 ASGR1P07306 291 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 ZNF865P0CJ78 1059 aaPredicted RBP9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 DMDP11532 3685 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 CALD1Q05682 793 aaKnown RBP9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 PUS10Q3MIT2 529 aaKnown RBP9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 HERC4Q5GLZ8 1057 aaPredicted RBP9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 BMP8AQ7Z5Y6 402 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 NCAPG2Q86XI2 1143 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 LPIN2Q92539 896 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 VWCEQ96DN2 955 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 SCLYQ96I15 445 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 SPATC1LQ9H0A9 340 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 DNAJC18Q9H819 358 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 ALG13Q9NP73 1137 aaKnown RBP9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 DENND2AQ9ULE3 1009 aa9.86□□□□□ -0.83
TMEM106C-218ENST00000552187 DMXL1Q9Y485 3027 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 PLXNA3P51805 1871 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 GPR75-ASB3A0A0A6YYF3 556 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 PRR23AA6NEV1 266 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 KIF28PB7ZC32 967 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 C6orf222P0C671 652 aaPredicted RBP9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 PKN1Q16512 942 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 ADHFE1Q8IWW8 467 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 ABRAQ8N0Z2 381 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 ZGPATQ8N5A5 531 aaKnown RBP9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 SHCBP1Q8NEM2 672 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 TSR2Q969E8 191 aaKnown RBP9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 KAZALD1Q96I82 304 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 SLC9A7Q96T83 725 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 TINF2Q9BSI4 451 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 NOC4LQ9BVI4 516 aaKnown RBP9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 TRIM34Q9BYJ4 488 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 IRF2BPLQ9H1B7 796 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 PI4KBQ9UBF8 816 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 PRKAG3Q9UGI9 489 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 CNPY2Q9Y2B0 182 aa9.85□□□□□ -0.83
TMEM106C-218ENST00000552187 FAM208BQ5VWN6 2430 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 DNAH14Q0VDD8 3507 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 PROB1E7EW31 1015 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 H0Y858 1186 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 PGK2P07205 417 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 PHKA1P46020 1223 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 PLS1Q14651 629 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 TWISTNBQ3B726 338 aaPredicted RBP9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 TRIM67Q6ZTA4 783 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 EP400NLQ6ZTU2 488 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 HERC6Q8IVU3 1022 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 CRACR2BQ8N4Y2 399 aaPredicted RBP9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 PCSK9Q8NBP7 692 aaKnown RBP9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 NEK9Q8TD19 979 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 EDAQ92838 391 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 COL26A1Q96A83 441 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 FSD1Q9BTV5 496 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 BICC1Q9H694 974 aaKnown RBP9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 RPAP3Q9H6T3 665 aaPredicted RBP9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 TLR9Q9NR96 1032 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 GINM1Q9NU53 330 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 MTUS1Q9ULD2 1270 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 FAM50BQ9Y247 325 aa9.84□□□□□ -0.83
TMEM106C-218ENST00000552187 ZNF292O60281 2723 aa9.84□□□□□ -0.84
TMEM106C-218ENST00000552187 MYO7AQ13402 2215 aa9.83□□□□□ -0.84
TMEM106C-218ENST00000552187 LCHNA4D1U4 455 aa9.83□□□□□ -0.84
TMEM106C-218ENST00000552187 SEMA3EO15041 775 aa9.83□□□□□ -0.84
TMEM106C-218ENST00000552187 GH2P01242 217 aa9.83□□□□□ -0.84
TMEM106C-218ENST00000552187 FCER1AP12319 257 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms