RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ARHGAP39Q9C0H5 1083 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 ZSWIM6Q9HCJ5 1215 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 CTDP1Q9Y5B0 961 aaPredicted RBP21.81■■□□□ 1.08
DDX54-209ENST00000551912 ECM2O94769 699 aaPredicted RBP21.8■■□□□ 1.08
DDX54-209ENST00000551912 GOLGA8HP0CJ92 632 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 FDX1P10109 184 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 SLC16A2P36021 539 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 TMEM132BQ14DG7 1078 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 RUFY3Q7L099 469 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 CCAR1Q8IX12 1150 aaKnown RBP21.8■■□□□ 1.08
DDX54-209ENST00000551912 ZNF654Q8IZM8 581 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 SPATC1LQ9H0A9 340 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 EFCC1Q9HA90 598 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 SLC38A10Q9HBR0 1119 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 PRR12Q9ULL5 1215 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 CYP46A1Q9Y6A2 500 aa21.8■■□□□ 1.08
DDX54-209ENST00000551912 DDAH1O94760 285 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 FMNL1O95466 1100 aaPredicted RBP21.79■■□□□ 1.08
DDX54-209ENST00000551912 GNRH1P01148 92 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 CAP1Q01518 475 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 TROAPQ12815 778 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 PLS1Q14651 629 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 SYDE2Q5VT97 1194 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 CTU1Q7Z7A3 348 aaKnown RBP21.79■■□□□ 1.08
DDX54-209ENST00000551912 SGMS1Q86VZ5 419 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 REPS2Q8NFH8 660 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 TRIM47Q96LD4 638 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 TRIM17Q9Y577 477 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 SLC12A7Q9Y666 1083 aa21.79■■□□□ 1.08
DDX54-209ENST00000551912 TNPO2O14787 897 aaKnown RBP21.78■■□□□ 1.08
DDX54-209ENST00000551912 CTGFP29279 349 aa21.78■■□□□ 1.08
DDX54-209ENST00000551912 MAPK4P31152 587 aa21.78■■□□□ 1.08
DDX54-209ENST00000551912 GRM4Q14833 912 aa21.78■■□□□ 1.08
DDX54-209ENST00000551912 Q6ZUG5 572 aa21.78■■□□□ 1.08
DDX54-209ENST00000551912 NUP133Q8WUM0 1156 aa21.78■■□□□ 1.08
DDX54-209ENST00000551912 MOV10L1Q9BXT6 1211 aaKnown RBP21.78■■□□□ 1.08
DDX54-209ENST00000551912 PORCNQ9H237 461 aa21.78■■□□□ 1.08
DDX54-209ENST00000551912 CALM1P0DP23 149 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 CALM2P0DP24 149 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 CALM3P0DP25 149 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 SYNE3Q6ZMZ3 975 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 OTOP1Q7RTM1 612 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 FBXL16Q8N461 479 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 IL17RAQ96F46 866 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 MAP3K14Q99558 947 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 MYL10Q9BUA6 226 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 UPF3BQ9BZI7 483 aaKnown RBP21.77■■□□□ 1.08
DDX54-209ENST00000551912 UBA5Q9GZZ9 404 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 UPF2Q9HAU5 1272 aaKnown RBP21.77■■□□□ 1.08
DDX54-209ENST00000551912 MAD2L2Q9UI95 211 aa21.77■■□□□ 1.08
DDX54-209ENST00000551912 ZNF214Q9UL59 606 aaPredicted RBP21.77■■□□□ 1.08
DDX54-209ENST00000551912 COL11A1P12107 1806 aaPredicted RBP21.77■■□□□ 1.08
DDX54-209ENST00000551912 PALM3A6NDB9 673 aaPredicted RBP21.76■■□□□ 1.07
DDX54-209ENST00000551912 ATP2A1O14983 1001 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 HOXD10P28358 340 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 STAT3P40763 770 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 OAZ1P54368 228 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 CPXCR1Q8N123 301 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 STAG2Q8N3U4 1231 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 CTCFLQ8NI51 663 aaPredicted RBP21.76■■□□□ 1.07
DDX54-209ENST00000551912 COA7Q96BR5 231 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 TEX13BQ9BXU2 312 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 CWC22Q9HCG8 908 aaKnown RBP21.76■■□□□ 1.07
DDX54-209ENST00000551912 ZSWIM8A7E2V4 1837 aa21.76■■□□□ 1.07
DDX54-209ENST00000551912 MGAMO43451 1857 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 KLRF2D3W0D1 207 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 SLC25A27O95847 323 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 KIF5BP33176 963 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 WDR78Q5VTH9 848 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 APOA5Q6Q788 366 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 RIOX2Q8IUF8 465 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 SHCBP1Q8NEM2 672 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 BRF1Q92994 677 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 AGXT2Q9BYV1 514 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 C22orf23Q9BZE7 217 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 RANBP17Q9H2T7 1088 aaKnown RBP21.75■■□□□ 1.07
DDX54-209ENST00000551912 CPVLQ9H3G5 476 aa21.75■■□□□ 1.07
DDX54-209ENST00000551912 RAVER2Q9HCJ3 691 aaKnown RBP21.75■■□□□ 1.07
DDX54-209ENST00000551912 KLF18A0A0U1RQI7 1052 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 ERCC3P19447 782 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 COPB2P35606 906 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 SNAP25P60880 206 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 PKN2Q16513 984 aaKnown RBP21.74■■□□□ 1.07
DDX54-209ENST00000551912 COL13A1Q5TAT6 717 aaPredicted RBP21.74■■□□□ 1.07
DDX54-209ENST00000551912 SNRNP48Q6IEG0 339 aaKnown RBP21.74■■□□□ 1.07
DDX54-209ENST00000551912 GPR142Q7Z601 462 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 NCAPG2Q86XI2 1143 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 MROH8Q9H579 483 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 SRRDQ9UH36 339 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 BRPF3Q9ULD4 1205 aa21.74■■□□□ 1.07
DDX54-209ENST00000551912 ZBTB43O43298 467 aa21.73■■□□□ 1.07
DDX54-209ENST00000551912 DHX16O60231 1041 aaKnown RBP21.73■■□□□ 1.07
DDX54-209ENST00000551912 PRMT2P55345 433 aa21.73■■□□□ 1.07
DDX54-209ENST00000551912 CCDC174Q6PII3 467 aa21.73■■□□□ 1.07
DDX54-209ENST00000551912 PLEKHH3Q7Z736 793 aa21.73■■□□□ 1.07
DDX54-209ENST00000551912 MICU3Q86XE3 530 aa21.73■■□□□ 1.07
DDX54-209ENST00000551912 ADGRF4Q8IZF3 695 aa21.73■■□□□ 1.07
DDX54-209ENST00000551912 PDRG1Q9NUG6 133 aa21.73■■□□□ 1.07
DDX54-209ENST00000551912 IVNS1ABPQ9Y6Y0 642 aa21.73■■□□□ 1.07
DDX54-209ENST00000551912 RXRAP19793 462 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms