RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 GBP3Q9H0R5 595 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 CCDC88BA6NC98 1476 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 RALGAPBQ86X10 1494 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 A0A1W2PQU0 124 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 NOP56O00567 594 aaKnown RBP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 TNRC18O15417 2968 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 ADCY3O60266 1144 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 PPM1BO75688 479 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 UBOX5O94941 541 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 WISP1O95388 367 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 CST3P01034 146 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 MYCLP1P12525 358 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 USP11P51784 963 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 SLBPQ14493 270 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 CT47A1Q5JQC4 288 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 IGF2-ASQ6U949 168 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 KIAA1211Q6ZU35 1233 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 NIM1KQ8IY84 436 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 SMYD4Q8IYR2 804 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 ISL2Q96A47 359 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 ZNF512BQ96KM6 892 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 FGD4Q96M96 766 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 DHRS4Q9BTZ2 278 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 MRPL18Q9H0U6 180 aaKnown RBP7.29□□□□□ -1.24
CPSF6-206ENST00000550987 SUGCTQ9HAC7 445 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 PCOLCE2Q9UKZ9 415 aa7.29□□□□□ -1.24
CPSF6-206ENST00000550987 USP19O94966 1318 aa7.28□□□□□ -1.24
CPSF6-206ENST00000550987 PIK3R2O00459 728 aa7.28□□□□□ -1.24
CPSF6-206ENST00000550987 SART1O43290 800 aaKnown RBP7.28□□□□□ -1.24
CPSF6-206ENST00000550987 AMPD3Q01432 767 aa7.28□□□□□ -1.24
CPSF6-206ENST00000550987 FAM209AQ5JX71 171 aa7.28□□□□□ -1.24
CPSF6-206ENST00000550987 AXDND1Q5T1B0 1012 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-206ENST00000550987 SCUBE1Q8IWY4 988 aa7.28□□□□□ -1.24
CPSF6-206ENST00000550987 NINJ1Q92982 152 aa7.28□□□□□ -1.24
CPSF6-206ENST00000550987 MFSD3Q96ES6 412 aa7.28□□□□□ -1.24
CPSF6-206ENST00000550987 PLVAPQ9BX97 442 aa7.28□□□□□ -1.24
CPSF6-206ENST00000550987 TRBV23-1A0A0A0MS06 115 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 C9IYK1 514 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 NEFMP07197 916 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 NTF4P34130 210 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 DGKGP49619 791 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 PABPC4Q13310 644 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPSF6-206ENST00000550987 CBX2Q14781 532 aaPredicted RBP7.27□□□□□ -1.25
CPSF6-206ENST00000550987 NOL9Q5SY16 702 aaKnown RBP7.27□□□□□ -1.25
CPSF6-206ENST00000550987 NOL8Q76FK4 1167 aaKnown RBP7.27□□□□□ -1.25
CPSF6-206ENST00000550987 PPFIBP1Q86W92 1011 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 MFSD2AQ8NA29 543 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 CHAC2Q8WUX2 184 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 AARSD1Q9BTE6 412 aaKnown RBP7.27□□□□□ -1.25
CPSF6-206ENST00000550987 FBXL21Q9UKT6 434 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 KIF14Q15058 1648 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 AGLP35573 1532 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 NPHP4O75161 1426 aaPredicted RBP7.27□□□□□ -1.25
CPSF6-206ENST00000550987 CNTLNQ9NXG0 1405 aa7.27□□□□□ -1.25
CPSF6-206ENST00000550987 DIP2AQ14689 1571 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 MED14O60244 1454 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 ATP10BO94823 1461 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 IRS4O14654 1257 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-206ENST00000550987 PRODHO43272 600 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 ITGAVP06756 1048 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 CAP2P40123 477 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 RNF4P78317 190 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 PRRT3Q5FWE3 981 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 FOXB2Q5VYV0 432 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 DCAF15Q66K64 600 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 ANKRD34AQ69YU3 496 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 NSMFQ6X4W1 530 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 KRT26Q7Z3Y9 468 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 DDX56Q9NY93 547 aaKnown RBP7.26□□□□□ -1.25
CPSF6-206ENST00000550987 CEP131Q9UPN4 1083 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 AKT3Q9Y243 479 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 MRPS23Q9Y3D9 190 aaKnown RBP7.26□□□□□ -1.25
CPSF6-206ENST00000550987 SPHKAPQ2M3C7 1700 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 DEPDC5O75140 1603 aa7.26□□□□□ -1.25
CPSF6-206ENST00000550987 NRKQ7Z2Y5 1582 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 CFAP74Q9C0B2 1584 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 FAM83GA6ND36 823 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 PLD2O14939 933 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 GAS2O43903 313 aaKnown RBP7.25□□□□□ -1.25
CPSF6-206ENST00000550987 LRIG2O94898 1065 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 RAB6AP20340 208 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 PPP2R2AP63151 447 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 POMZP3Q6PJE2 187 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 ARMCX6Q7L4S7 300 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 UBE3DQ7Z6J8 389 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 BVESQ8NE79 360 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 CEP89Q96ST8 783 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 LGR6Q9HBX8 967 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 ARHGEF4Q9NR80 690 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 FAM105AQ9NUU6 356 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 WHRNQ9P202 907 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 SUSD2Q9UGT4 822 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 ZNF451Q9Y4E5 1061 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 ACTL7BQ9Y614 415 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.25□□□□□ -1.256e-7■■□□□ 12.9
CPSF6-206ENST00000550987 KDM5DQ9BY66 1539 aa7.25□□□□□ -1.25
CPSF6-206ENST00000550987 BRWD3Q6RI45 1802 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 A2ML1A8K2U0 1454 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 BIVM-ERCC5R4GMW8 1640 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms