RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.31
TPCN1-213ENST00000550543 PCSK9Q8NBP7 692 aaKnown RBP16.96■□□□□ 0.31
TPCN1-213ENST00000550543 CHST13Q8NET6 341 aa16.96■□□□□ 0.31
TPCN1-213ENST00000550543 REPS2Q8NFH8 660 aa16.96■□□□□ 0.31
TPCN1-213ENST00000550543 DCTPP1Q9H773 170 aa16.96■□□□□ 0.31
TPCN1-213ENST00000550543 RLFQ13129 1914 aa16.96■□□□□ 0.3
TPCN1-213ENST00000550543 TTC41PQ6P2S7 1318 aa16.96■□□□□ 0.3
TPCN1-213ENST00000550543 GPAA1O43292 621 aa16.95■□□□□ 0.3
TPCN1-213ENST00000550543 NDUFB10O96000 172 aa16.95■□□□□ 0.3
TPCN1-213ENST00000550543 TLE2Q04725 743 aa16.95■□□□□ 0.3
TPCN1-213ENST00000550543 GMCL1P1Q8NEA9 526 aa16.95■□□□□ 0.3
TPCN1-213ENST00000550543 BADQ92934 168 aa16.95■□□□□ 0.3
TPCN1-213ENST00000550543 MKL1Q969V6 931 aa16.95■□□□□ 0.3
TPCN1-213ENST00000550543 FERMT2Q96AC1 680 aa16.95■□□□□ 0.3
TPCN1-213ENST00000550543 ZBTB47Q9UFB7 747 aaPredicted RBP16.95■□□□□ 0.3
TPCN1-213ENST00000550543 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
TPCN1-213ENST00000550543 DUSP11O75319 330 aaKnown RBP16.94■□□□□ 0.3
TPCN1-213ENST00000550543 ZNF865P0CJ78 1059 aaPredicted RBP16.94■□□□□ 0.3
TPCN1-213ENST00000550543 RAG1P15918 1043 aa16.94■□□□□ 0.3
TPCN1-213ENST00000550543 SLFNL1Q499Z3 407 aa16.94■□□□□ 0.3
TPCN1-213ENST00000550543 ANKRD35Q8N283 1001 aa16.94■□□□□ 0.3
TPCN1-213ENST00000550543 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.94■□□□□ 0.3
TPCN1-213ENST00000550543 ABHD16BQ9H3Z7 469 aa16.94■□□□□ 0.3
TPCN1-213ENST00000550543 STARD7Q9NQZ5 370 aa16.94■□□□□ 0.3
TPCN1-213ENST00000550543 CLIP2Q9UDT6 1046 aa16.94■□□□□ 0.3
TPCN1-213ENST00000550543 ELP1O95163 1332 aa16.94■□□□□ 0.3
TPCN1-213ENST00000550543 CUL9Q8IWT3 2517 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 A0A1W2PQ45 241 aaPredicted RBP16.93■□□□□ 0.3
TPCN1-213ENST00000550543 A0A1W2PQY0 241 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 PATL2C9JE40 543 aaKnown RBP16.93■□□□□ 0.3
TPCN1-213ENST00000550543 PGK1P00558 417 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 SHHQ15465 462 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 FAM160B2Q86V87 743 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 CHURC1Q8WUH1 139 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 OSBP2Q969R2 916 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 GLT1D1Q96MS3 346 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 SEZ6LQ9BYH1 1024 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 SLC38A10Q9HBR0 1119 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 TMEM39AQ9NV64 488 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 MTMR4Q9NYA4 1195 aa16.93■□□□□ 0.3
TPCN1-213ENST00000550543 MYH7P12883 1935 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 PLIN4Q96Q06 1357 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 BAZ2AQ9UIF9 1905 aaKnown RBP16.92■□□□□ 0.3
TPCN1-213ENST00000550543 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 SMARCA5O60264 1052 aaPredicted RBP16.92■□□□□ 0.3
TPCN1-213ENST00000550543 CST5P28325 142 aaPredicted RBP16.92■□□□□ 0.3
TPCN1-213ENST00000550543 ACLYP53396 1101 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 FPGSQ05932 587 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 CPXCR1Q8N123 301 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 KIFC2Q96AC6 838 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 RNPC3Q96LT9 517 aaKnown RBP16.92■□□□□ 0.3
TPCN1-213ENST00000550543 NAPBQ9H115 298 aa16.92■□□□□ 0.3
TPCN1-213ENST00000550543 ZHX1Q9UKY1 873 aaPredicted RBP16.92■□□□□ 0.3
TPCN1-213ENST00000550543 IGKV6D-41A0A0C4DH26 115 aa16.91■□□□□ 0.3
TPCN1-213ENST00000550543 PQBP1O60828 265 aaKnown RBP16.91■□□□□ 0.3
TPCN1-213ENST00000550543 ADAMTS4O75173 837 aa16.91■□□□□ 0.3
TPCN1-213ENST00000550543 BMP3P12645 472 aa16.91■□□□□ 0.3
TPCN1-213ENST00000550543 STAT2P52630 851 aa16.91■□□□□ 0.3
TPCN1-213ENST00000550543 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.91■□□□□ 0.3
TPCN1-213ENST00000550543 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
TPCN1-213ENST00000550543 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
TPCN1-213ENST00000550543 GUCD1Q96NT3 240 aa16.91■□□□□ 0.3
TPCN1-213ENST00000550543 SYNRGQ9UMZ2 1314 aa16.91■□□□□ 0.3
TPCN1-213ENST00000550543 TRIM43BA6NCK2 446 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 ASB14A6NK59 587 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 TLR3O15455 904 aaKnown RBP16.9■□□□□ 0.3
TPCN1-213ENST00000550543 PLA2G6O60733 806 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 ACVR2BQ13705 512 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 TICAM2Q86XR7 235 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 IFNL3Q8IZI9 196 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 TRIM43Q96BQ3 446 aaPredicted RBP16.9■□□□□ 0.3
TPCN1-213ENST00000550543 GMCL1Q96IK5 515 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
TPCN1-213ENST00000550543 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
TPCN1-213ENST00000550543 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.9■□□□□ 0.3
TPCN1-213ENST00000550543 ISY1Q9ULR0 285 aaKnown RBP16.9■□□□□ 0.3
TPCN1-213ENST00000550543 SMIM22K7EJ46 135 aa16.89■□□□□ 0.29
TPCN1-213ENST00000550543 CABYRO75952 493 aa16.89■□□□□ 0.29
TPCN1-213ENST00000550543 CHGBP05060 677 aa16.89■□□□□ 0.29
TPCN1-213ENST00000550543 TAL1P17542 331 aaPredicted RBP16.89■□□□□ 0.29
TPCN1-213ENST00000550543 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
TPCN1-213ENST00000550543 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.297e-7■■□□□ 14.3
TPCN1-213ENST00000550543 FSD1Q9BTV5 496 aa16.89■□□□□ 0.29
TPCN1-213ENST00000550543 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
TPCN1-213ENST00000550543 PNMA2Q9UL42 364 aa16.89■□□□□ 0.29
TPCN1-213ENST00000550543 PARP14Q460N5 1801 aa16.89■□□□□ 0.29
TPCN1-213ENST00000550543 A0A0U1RQG5 324 aaPredicted RBP16.88■□□□□ 0.29
TPCN1-213ENST00000550543 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.88■□□□□ 0.29
TPCN1-213ENST00000550543 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.88■□□□□ 0.29
TPCN1-213ENST00000550543 ZEB2O60315 1214 aa16.88■□□□□ 0.29
TPCN1-213ENST00000550543 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
TPCN1-213ENST00000550543 C6orf222P0C671 652 aaPredicted RBP16.88■□□□□ 0.29
TPCN1-213ENST00000550543 SLC1A4P43007 532 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms