RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 NDUFB10O96000 172 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 KLRC3Q07444 240 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 LRRFIP1Q32MZ4 808 aaKnown RBP12.96□□□□□ -0.33
PFDN5-210ENST00000550513 C1orf53Q5VUE5 145 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 RNF180Q86T96 592 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 LENG1Q96BZ8 264 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-210ENST00000550513 DCTPP1Q9H773 170 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 PHF24Q9UPV7 400 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
PFDN5-210ENST00000550513 A0A1W2PQ45 241 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-210ENST00000550513 A0A1W2PQY0 241 aa12.95□□□□□ -0.34
PFDN5-210ENST00000550513 PGK1P00558 417 aa12.95□□□□□ -0.34
PFDN5-210ENST00000550513 APPP05067 770 aa12.95□□□□□ -0.34
PFDN5-210ENST00000550513 TAL1P17542 331 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-210ENST00000550513 ZNF697Q5TEC3 545 aa12.95□□□□□ -0.34
PFDN5-210ENST00000550513 ZNF444Q8N0Y2 327 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-210ENST00000550513 LRRC47Q8N1G4 583 aaKnown RBP12.95□□□□□ -0.34
PFDN5-210ENST00000550513 MSL3Q8N5Y2 521 aaKnown RBP12.95□□□□□ -0.34
PFDN5-210ENST00000550513 PRPF38AQ8NAV1 312 aaKnown RBP12.95□□□□□ -0.34
PFDN5-210ENST00000550513 BADQ92934 168 aa12.95□□□□□ -0.34
PFDN5-210ENST00000550513 CEP95Q96GE4 821 aa12.95□□□□□ -0.34
PFDN5-210ENST00000550513 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-210ENST00000550513 TTC41PQ6P2S7 1318 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 SYNRGQ9UMZ2 1314 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 IGKV6D-41A0A0C4DH26 115 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 PRDM1O75626 825 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 CLTBP09497 229 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 ZNF865P0CJ78 1059 aaPredicted RBP12.94□□□□□ -0.34
PFDN5-210ENST00000550513 SLC4A3P48751 1232 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 FAM109BQ6ICB4 259 aaPredicted RBP12.94□□□□□ -0.34
PFDN5-210ENST00000550513 CPXCR1Q8N123 301 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 DDX11Q96FC9 970 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 CLIP2Q9UDT6 1046 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 ZHX1Q9UKY1 873 aaPredicted RBP12.94□□□□□ -0.34
PFDN5-210ENST00000550513 SYNPO2Q9UMS6 1093 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 RIPK3Q9Y572 518 aa12.94□□□□□ -0.34
PFDN5-210ENST00000550513 TRIM43BA6NCK2 446 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 POTEB2H3BUK9 544 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 ATP2A1O14983 1001 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 ERC2O15083 957 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 ZBED4O75132 1171 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 ADAMTS4O75173 837 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 TTLL1O95922 423 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 TLE2Q04725 743 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 SHHQ15465 462 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 C9orf50Q5SZB4 431 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 SH3RF1Q7Z6J0 888 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 IFNL3Q8IZI9 196 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-210ENST00000550513 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 GUCD1Q96NT3 240 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 FSD1Q9BTV5 496 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 MTMR4Q9NYA4 1195 aa12.93□□□□□ -0.34
PFDN5-210ENST00000550513 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
PFDN5-210ENST00000550513 DNAJC25-GNG10A0A024R161 153 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 PATL2C9JE40 543 aaKnown RBP12.92□□□□□ -0.34
PFDN5-210ENST00000550513 PQBP1O60828 265 aaKnown RBP12.92□□□□□ -0.34
PFDN5-210ENST00000550513 SLC3A2P08195 630 aaKnown RBP12.92□□□□□ -0.34
PFDN5-210ENST00000550513 PDE4BQ07343 736 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 MAMDC4Q6UXC1 1216 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.92□□□□□ -0.34
PFDN5-210ENST00000550513 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
PFDN5-210ENST00000550513 GMCL1P1Q8NEA9 526 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 PI4K2BQ8TCG2 481 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 MKL1Q969V6 931 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 SEC62Q99442 399 aaKnown RBP12.92□□□□□ -0.34
PFDN5-210ENST00000550513 TANC1Q9C0D5 1861 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 NAPBQ9H115 298 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 SLC38A10Q9HBR0 1119 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 RAVER2Q9HCJ3 691 aaKnown RBP12.92□□□□□ -0.34
PFDN5-210ENST00000550513 STARD7Q9NQZ5 370 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 FBXO40Q9UH90 709 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 FEM1BQ9UK73 627 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
PFDN5-210ENST00000550513 MOXD2PA6NHM9 499 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 SNAI1O95863 264 aaPredicted RBP12.91□□□□□ -0.34
PFDN5-210ENST00000550513 BMP3P12645 472 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 RAG1P15918 1043 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 STAT2P52630 851 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 ACLYP53396 1101 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 OAZ1P54368 228 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 PPARAQ07869 468 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 ANKRD35Q8N283 1001 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 NUP133Q8WUM0 1156 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 TSEN34Q9BSV6 310 aaKnown RBP12.91□□□□□ -0.34
PFDN5-210ENST00000550513 HOMER2Q9NSB8 354 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
PFDN5-210ENST00000550513 KIAA0355O15063 1070 aa12.9□□□□□ -0.34
PFDN5-210ENST00000550513 MX1P20591 662 aa12.9□□□□□ -0.34
PFDN5-210ENST00000550513 ITGB8P26012 769 aa12.9□□□□□ -0.34
PFDN5-210ENST00000550513 SMAD3P84022 425 aaKnown RBP12.9□□□□□ -0.34
PFDN5-210ENST00000550513 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
PFDN5-210ENST00000550513 ZMYM1Q5SVZ6 1142 aa12.9□□□□□ -0.34
PFDN5-210ENST00000550513 SLFN13Q68D06 897 aa12.9□□□□□ -0.34
PFDN5-210ENST00000550513 CHST13Q8NET6 341 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms