RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 ELP1O95163 1332 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 LINC01387J3KSC0 135 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 J3QW42 95 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 SASH1O94885 1247 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 MAP4P27816 1152 aaKnown RBP6.33□□□□□ -1.4
KRR1-203ENST00000550023 RAP1GAPP47736 663 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 SEMA3FQ13275 785 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 G3BP1Q13283 466 aaKnown RBP eCLIP6.33□□□□□ -1.4
KRR1-203ENST00000550023 PLCL1Q15111 1095 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 RGS22Q8NE09 1264 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 ANP32BQ92688 251 aaKnown RBP6.33□□□□□ -1.4
KRR1-203ENST00000550023 MAP4K1Q92918 833 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 TLR7Q9NYK1 1049 aaKnown RBP6.33□□□□□ -1.4
KRR1-203ENST00000550023 TIAM2Q8IVF5 1701 aa6.33□□□□□ -1.4
KRR1-203ENST00000550023 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.33□□□□□ -1.4
KRR1-203ENST00000550023 PRAMEF22A3QJZ6 481 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 ANXA1P04083 346 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 PSAPP07602 524 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 IL2RBP14784 551 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 PDCP20941 246 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 RXRBP28702 533 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 MCM5P33992 734 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 PREPP48147 710 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 PTPN12Q05209 780 aaKnown RBP6.32□□□□□ -1.4
KRR1-203ENST00000550023 NECTIN1Q15223 517 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 TNNI3KQ59H18 835 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 FAM117BQ6P1L5 589 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 LRSAM1Q6UWE0 723 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 RUFY3Q7L099 469 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 FBXL16Q8N461 479 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 CCDC191Q8NCU4 936 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 GPT2Q8TD30 523 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 EAF2Q96CJ1 260 aaPredicted RBP6.32□□□□□ -1.4
KRR1-203ENST00000550023 NGLY1Q96IV0 654 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 HAUS7Q99871 368 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 PLA2G12BQ9BX93 195 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 UPF3BQ9BZI7 483 aaKnown RBP6.32□□□□□ -1.4
KRR1-203ENST00000550023 PRDM11Q9NQV5 511 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 KCNK4Q9NYG8 393 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 DBNLQ9UJU6 430 aaKnown RBP6.32□□□□□ -1.4
KRR1-203ENST00000550023 TRIM33Q9UPN9 1127 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 CYP46A1Q9Y6A2 500 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 FPGT-TNNI3KV9GXZ4 949 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 BCL9O00512 1426 aa6.32□□□□□ -1.4
KRR1-203ENST00000550023 CDHR2Q9BYE9 1310 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 NWD2Q9ULI1 1742 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 ROBO1Q9Y6N7 1651 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 A0A0D9SFI3 127 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 ZBTB7CA1YPR0 619 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 LETM1O95202 739 aaPredicted RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 HMGB1P09429 215 aaKnown RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 ZSCAN22P10073 491 aaPredicted RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 CASTP20810 708 aaKnown RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 IL15P40933 162 aaPredicted RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 AK2P54819 239 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 CABP4P57796 275 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 ZC3H6P61129 1189 aaKnown RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 UBE2HP62256 183 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 CREB3L3Q68CJ9 461 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 CAVIN1Q6NZI2 390 aaKnown RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 FDX2Q6P4F2 183 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 CWC27Q6UX04 472 aaKnown RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 TTLL10Q6ZVT0 673 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 COPS6Q7L5N1 327 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 ATG4DQ86TL0 474 aaPredicted RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 GAS2L3Q86XJ1 694 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 KLHL23Q8NBE8 558 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 CHMP4CQ96CF2 233 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 JAKMIP1Q96N16 626 aaKnown RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 MYD88Q99836 296 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 FSD1Q9BTV5 496 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 PANK2Q9BZ23 570 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 GZF1Q9H116 711 aaPredicted RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 CWC25Q9NXE8 425 aaPredicted RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 RBM8AQ9Y5S9 174 aaKnown RBP6.31□□□□□ -1.4
KRR1-203ENST00000550023 LAMA4Q16363 1823 aa6.31□□□□□ -1.4
KRR1-203ENST00000550023 PHLPP1O60346 1717 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 ZMYM6O95789 1325 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 WDR19Q8NEZ3 1342 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 SLC27A2O14975 620 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 STX6O43752 255 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 F13A1P00488 732 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 RPS6KB1P23443 525 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 CFPP27918 469 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 VAC14Q08AM6 782 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 NMIQ13287 307 aaPredicted RBP6.3□□□□□ -1.4
KRR1-203ENST00000550023 LRRFIP1Q32MZ4 808 aaKnown RBP6.3□□□□□ -1.4
KRR1-203ENST00000550023 CCDC183Q5T5S1 534 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 KBTBD3Q8NAB2 608 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 NFATC2IPQ8NCF5 419 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 ZCRB1Q8TBF4 217 aaKnown RBP6.3□□□□□ -1.4
KRR1-203ENST00000550023 ISCA1Q9BUE6 129 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 DSCC1Q9BVC3 393 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 TEX13AQ9BXU3 409 aaPredicted RBP6.3□□□□□ -1.4
KRR1-203ENST00000550023 AGXT2Q9BYV1 514 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 PA2G4Q9UQ80 394 aaKnown RBP6.3□□□□□ -1.4
KRR1-203ENST00000550023 SMC3Q9UQE7 1217 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 DOT1LQ8TEK3 1739 aa6.3□□□□□ -1.4
KRR1-203ENST00000550023 RTL9Q8NET4 1388 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms