RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 BTNL9Q6UXG8 535 aa22.67■■□□□ 1.22
DDX54-207ENST00000550016 REPS2Q8NFH8 660 aa22.67■■□□□ 1.22
DDX54-207ENST00000550016 TMEM87BQ96K49 555 aa22.67■■□□□ 1.22
DDX54-207ENST00000550016 MOV10L1Q9BXT6 1211 aaKnown RBP22.67■■□□□ 1.22
DDX54-207ENST00000550016 GPCPD1Q9NPB8 672 aa22.67■■□□□ 1.22
DDX54-207ENST00000550016 CTDP1Q9Y5B0 961 aaPredicted RBP22.67■■□□□ 1.22
DDX54-207ENST00000550016 SNX14Q9Y5W7 946 aa22.67■■□□□ 1.22
DDX54-207ENST00000550016 FRMPD2Q68DX3 1309 aaPredicted RBP22.66■■□□□ 1.22
DDX54-207ENST00000550016 COL9A3Q14050 684 aaPredicted RBP22.66■■□□□ 1.22
DDX54-207ENST00000550016 GPATCH4Q5T3I0 446 aaKnown RBP22.66■■□□□ 1.22
DDX54-207ENST00000550016 TTBK2Q6IQ55 1244 aa22.66■■□□□ 1.22
DDX54-207ENST00000550016 SHCBP1Q8NEM2 672 aa22.66■■□□□ 1.22
DDX54-207ENST00000550016 SLC38A10Q9HBR0 1119 aa22.66■■□□□ 1.22
DDX54-207ENST00000550016 SMCHD1A6NHR9 2005 aa22.65■■□□□ 1.22
DDX54-207ENST00000550016 HMGB1P09429 215 aaKnown RBP22.65■■□□□ 1.22
DDX54-207ENST00000550016 STAT3P40763 770 aa22.65■■□□□ 1.22
DDX54-207ENST00000550016 PLEKHH3Q7Z736 793 aa22.65■■□□□ 1.22
DDX54-207ENST00000550016 TMTC2Q8N394 836 aa22.65■■□□□ 1.22
DDX54-207ENST00000550016 LY9Q9HBG7 655 aa22.65■■□□□ 1.22
DDX54-207ENST00000550016 SENP2Q9HC62 589 aa22.65■■□□□ 1.22
DDX54-207ENST00000550016 CWC22Q9HCG8 908 aaKnown RBP22.65■■□□□ 1.22
DDX54-207ENST00000550016 ZNF214Q9UL59 606 aaPredicted RBP22.65■■□□□ 1.22
DDX54-207ENST00000550016 PRR12Q9ULL5 1215 aa22.65■■□□□ 1.22
DDX54-207ENST00000550016 GABRQQ9UN88 632 aa22.65■■□□□ 1.22
DDX54-207ENST00000550016 WDR19Q8NEZ3 1342 aa22.64■■□□□ 1.22
DDX54-207ENST00000550016 ATP2A1O14983 1001 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 SLC25A27O95847 323 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 PRKCZQ05513 592 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 ASPRV1Q53RT3 343 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 DHX32Q7L7V1 743 aaKnown RBP22.64■■□□□ 1.21
DDX54-207ENST00000550016 GPR142Q7Z601 462 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 RIOX2Q8IUF8 465 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 MROH8Q9H579 483 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 GJD2Q9UKL4 321 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 PTCH2Q9Y6C5 1203 aa22.64■■□□□ 1.21
DDX54-207ENST00000550016 SH2B2O14492 632 aaPredicted RBP22.63■■□□□ 1.21
DDX54-207ENST00000550016 PARP1P09874 1014 aaKnown RBP22.63■■□□□ 1.21
DDX54-207ENST00000550016 ERCC3P19447 782 aa22.63■■□□□ 1.21
DDX54-207ENST00000550016 SLC16A2P36021 539 aa22.63■■□□□ 1.21
DDX54-207ENST00000550016 FLT3LGP49771 235 aa22.63■■□□□ 1.21
DDX54-207ENST00000550016 OAZ1P54368 228 aa22.63■■□□□ 1.21
DDX54-207ENST00000550016 EXOSC10Q01780 885 aaKnown RBP22.63■■□□□ 1.21
DDX54-207ENST00000550016 SYDE2Q5VT97 1194 aa22.63■■□□□ 1.21
DDX54-207ENST00000550016 WDR78Q5VTH9 848 aa22.63■■□□□ 1.21
DDX54-207ENST00000550016 RAET1EQ8TD07 263 aa22.63■■□□□ 1.21
DDX54-207ENST00000550016 TEX13BQ9BXU2 312 aa22.63■■□□□ 1.21
DDX54-207ENST00000550016 GPHNQ9NQX3 736 aaPredicted RBP22.63■■□□□ 1.21
DDX54-207ENST00000550016 GOLGA8HP0CJ92 632 aa22.62■■□□□ 1.21
DDX54-207ENST00000550016 COPB2P35606 906 aa22.62■■□□□ 1.21
DDX54-207ENST00000550016 LIFRP42702 1097 aa22.62■■□□□ 1.21
DDX54-207ENST00000550016 CATIPQ7Z7H3 387 aa22.62■■□□□ 1.21
DDX54-207ENST00000550016 NCAPG2Q86XI2 1143 aa22.62■■□□□ 1.21
DDX54-207ENST00000550016 CPXCR1Q8N123 301 aa22.62■■□□□ 1.21
DDX54-207ENST00000550016 JAKMIP1Q96N16 626 aaKnown RBP22.62■■□□□ 1.21
DDX54-207ENST00000550016 HPS5Q9UPZ3 1129 aa22.62■■□□□ 1.21
DDX54-207ENST00000550016 IVNS1ABPQ9Y6Y0 642 aa22.62■■□□□ 1.21
DDX54-207ENST00000550016 BAZ2BQ9UIF8 2168 aaKnown RBP22.62■■□□□ 1.21
DDX54-207ENST00000550016 SLC15A5A6NIM6 579 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 STRNO43815 780 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 PTPREP23469 700 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 PSMA5P28066 241 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 IRF5Q13568 498 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 MORN1Q5T089 497 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 SNRNP48Q6IEG0 339 aaKnown RBP22.61■■□□□ 1.21
DDX54-207ENST00000550016 SOCS4Q8WXH5 440 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 ABHD8Q96I13 439 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 NUDT12Q9BQG2 462 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 LRRC2Q9BYS8 371 aa22.61■■□□□ 1.21
DDX54-207ENST00000550016 RAVER2Q9HCJ3 691 aaKnown RBP22.61■■□□□ 1.21
DDX54-207ENST00000550016 PLXNA1Q9UIW2 1896 aa22.6■■□□□ 1.21
DDX54-207ENST00000550016 ZNF236Q9UL36 1845 aa22.6■■□□□ 1.21
DDX54-207ENST00000550016 CCDC69A6NI79 296 aa22.6■■□□□ 1.21
DDX54-207ENST00000550016 TROAPQ12815 778 aa22.6■■□□□ 1.21
DDX54-207ENST00000550016 BLOC1S2Q6QNY1 142 aa22.6■■□□□ 1.21
DDX54-207ENST00000550016 NFXL1Q6ZNB6 911 aa22.6■■□□□ 1.21
DDX54-207ENST00000550016 RANBP17Q9H2T7 1088 aaKnown RBP22.6■■□□□ 1.21
DDX54-207ENST00000550016 PALM3A6NDB9 673 aaPredicted RBP22.59■■□□□ 1.21
DDX54-207ENST00000550016 SNAP25P60880 206 aa22.59■■□□□ 1.21
DDX54-207ENST00000550016 GRM4Q14833 912 aa22.59■■□□□ 1.21
DDX54-207ENST00000550016 ZNF654Q8IZM8 581 aa22.59■■□□□ 1.21
DDX54-207ENST00000550016 USP6NLQ92738 828 aa22.59■■□□□ 1.21
DDX54-207ENST00000550016 MAP3K14Q99558 947 aa22.59■■□□□ 1.21
DDX54-207ENST00000550016 UBA5Q9GZZ9 404 aa22.59■■□□□ 1.21
DDX54-207ENST00000550016 MAD2L2Q9UI95 211 aa22.59■■□□□ 1.21
DDX54-207ENST00000550016 ZNF536O15090 1300 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 KLRF2D3W0D1 207 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 ADCY3O60266 1144 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 DDAH1O94760 285 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 SEC24BO95487 1268 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 SLC4A3P48751 1232 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 MAP2K5Q13163 448 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 GRB14Q14449 540 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 C8orf34Q49A92 452 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 SLC9C1Q4G0N8 1177 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 CCDC174Q6PII3 467 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 SGMS1Q86VZ5 419 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 ABRAQ8N0Z2 381 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 STAG2Q8N3U4 1231 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 TCEANC2Q96MN5 208 aa22.58■■□□□ 1.21
DDX54-207ENST00000550016 RIPK3Q9Y572 518 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms