RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 SART3Q15020 963 aaKnown RBP13.96□□□□□ -0.17
PFDN5-208ENST00000549995 ADCK5Q3MIX3 580 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 IFIT1BQ5T764 474 aaKnown RBP13.96□□□□□ -0.17
PFDN5-208ENST00000549995 RIOX2Q8IUF8 465 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 NEK1Q96PY6 1258 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.17
PFDN5-208ENST00000549995 AGXT2Q9BYV1 514 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 PORCNQ9H237 461 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 RANBP17Q9H2T7 1088 aaKnown RBP13.96□□□□□ -0.17
PFDN5-208ENST00000549995 KAT14Q9H8E8 782 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 GJD2Q9UKL4 321 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 TRIM17Q9Y577 477 aa13.96□□□□□ -0.17
PFDN5-208ENST00000549995 NID2Q14112 1375 aa13.96□□□□□ -0.18
PFDN5-208ENST00000549995 ZNF536O15090 1300 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
PFDN5-208ENST00000549995 PRC1O43663 620 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 PEX10O60683 326 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 SLC25A27O95847 323 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 ANAPC15P60006 121 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 WTAPQ15007 396 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 MORN1Q5T089 497 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 KCTD1Q719H9 257 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 DHX32Q7L7V1 743 aaKnown RBP13.95□□□□□ -0.18
PFDN5-208ENST00000549995 PAGR1Q9BTK6 254 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 TM6SF1Q9BZW5 370 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 MROH8Q9H579 483 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 PRR12Q9ULL5 1215 aa13.95□□□□□ -0.18
PFDN5-208ENST00000549995 ERICH2A1L162 156 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 PALM3A6NDB9 673 aaPredicted RBP13.94□□□□□ -0.18
PFDN5-208ENST00000549995 SMCHD1A6NHR9 2005 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 TNPO2O14787 897 aaKnown RBP13.94□□□□□ -0.18
PFDN5-208ENST00000549995 DDAH1O94760 285 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 IGHA2P01877 340 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 HOXC6P09630 235 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 HOXD10P28358 340 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 RCAN1P53805 252 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 GRB14Q14449 540 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 GRM4Q14833 912 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 TMEM67Q5HYA8 995 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 GPR142Q7Z601 462 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 TMTC2Q8N394 836 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 SOCS4Q8WXH5 440 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 TEX13BQ9BXU2 312 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 SENP2Q9HC62 589 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
PFDN5-208ENST00000549995 LRRC37A2A6NM11 1700 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 STRNO43815 780 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 FMNL1O95466 1100 aaPredicted RBP13.93□□□□□ -0.18
PFDN5-208ENST00000549995 XRCC5P13010 732 aaKnown RBP13.93□□□□□ -0.18
PFDN5-208ENST00000549995 STAT3P40763 770 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 PRKCZQ05513 592 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 SYDE2Q5VT97 1194 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 CHST3Q7LGC8 479 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 PLEKHH3Q7Z736 793 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 PXYLP1Q8TE99 480 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 COA7Q96BR5 231 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 ARMC5Q96C12 935 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 MTMR8Q96EF0 704 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 MAD2L2Q9UI95 211 aa13.93□□□□□ -0.18
PFDN5-208ENST00000549995 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 SLC15A5A6NIM6 579 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 RAD21O60216 631 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 ZBED4O75132 1171 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 ERCC3P19447 782 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 PTPREP23469 700 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 CCDC96Q2M329 555 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 TKFCQ3LXA3 575 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 TTBK2Q6IQ55 1244 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 ZNF654Q8IZM8 581 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 KIFC2Q96AC6 838 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 MAF1Q9H063 256 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 ZSWIM6Q9HCJ5 1215 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 PNMA2Q9UL42 364 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 GABRQQ9UN88 632 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 HPS5Q9UPZ3 1129 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 PTCH2Q9Y6C5 1203 aa13.92□□□□□ -0.18
PFDN5-208ENST00000549995 ICAM1P05362 532 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 PARP1P09874 1014 aaKnown RBP13.91□□□□□ -0.18
PFDN5-208ENST00000549995 RPS6KB1P23443 525 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 PSMA5P28066 241 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 FLT3LGP49771 235 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 EVCP57679 992 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 SLAIN1Q8ND83 568 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 CHST13Q8NET6 341 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 RIOX1Q9H6W3 641 aa13.91□□□□□ -0.18
PFDN5-208ENST00000549995 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
PFDN5-208ENST00000549995 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
PFDN5-208ENST00000549995 SEC24BO95487 1268 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 CALM1P0DP23 149 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 CALM2P0DP24 149 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 CALM3P0DP25 149 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 MAP2K5Q13163 448 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 SNRNP48Q6IEG0 339 aaKnown RBP13.9□□□□□ -0.18
PFDN5-208ENST00000549995 BLOC1S2Q6QNY1 142 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 CATIPQ7Z7H3 387 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms