RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 PCDHB12Q9Y5F1 795 aa12.15□□□□□ -0.46
PRIM1-204ENST00000549549 CELA2BP08218 269 aaPredicted RBP12.14□□□□□ -0.47
PRIM1-204ENST00000549549 RNF219Q5W0B1 726 aaPredicted RBP12.14□□□□□ -0.47
PRIM1-204ENST00000549549 MAMDC2Q7Z304 686 aaPredicted RBP12.14□□□□□ -0.47
PRIM1-204ENST00000549549 TMEM130Q8N3G9 435 aa12.14□□□□□ -0.47
PRIM1-204ENST00000549549 C1orf159Q96HA4 380 aa12.14□□□□□ -0.47
PRIM1-204ENST00000549549 ACSS3Q9H6R3 686 aa12.14□□□□□ -0.47
PRIM1-204ENST00000549549 GABBR1Q9UBS5 961 aa12.14□□□□□ -0.47
PRIM1-204ENST00000549549 TERTO14746 1132 aaKnown RBP12.13□□□□□ -0.47
PRIM1-204ENST00000549549 GPR39O43194 453 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 IGFALSP35858 605 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 ETV3P41162 512 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 MCL1Q07820 350 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 STRN3Q13033 797 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 ZNF460Q14592 562 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 SLC35F1Q5T1Q4 408 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 FDX2Q6P4F2 183 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 Q6ZNB5 142 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 WDR66Q8TBY9 1149 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 SLC16A10Q8TF71 515 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 BRF1Q92994 677 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 PSMG3-AS1Q96PY0 264 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 CYP26B1Q9NR63 512 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 SLC5A4Q9NY91 659 aa12.13□□□□□ -0.47
PRIM1-204ENST00000549549 TCRBV16S1A1N1A0A5B0 115 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 BLACEA4D250 179 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 PRC1O43663 620 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 OPA1O60313 960 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 BRINP1O60477 761 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 KATNA1O75449 491 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 SLITRK5O94991 958 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 RASGRP1O95267 797 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 NEK4P51957 841 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 SEPT7Q16181 437 aaKnown RBP12.12□□□□□ -0.47
PRIM1-204ENST00000549549 NOL9Q5SY16 702 aaKnown RBP12.12□□□□□ -0.47
PRIM1-204ENST00000549549 LYPD4Q6UWN0 246 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 CDH24Q86UP0 819 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 TMEM145Q8NBT3 493 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 TSR2Q969E8 191 aaKnown RBP12.12□□□□□ -0.47
PRIM1-204ENST00000549549 TRIM11Q96F44 468 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 MAGEB10Q96LZ2 347 aaPredicted RBP12.12□□□□□ -0.47
PRIM1-204ENST00000549549 FBXL21Q9UKT6 434 aa12.12□□□□□ -0.47
PRIM1-204ENST00000549549 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 TSPAN6O43657 245 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 CPP00450 1065 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 STAT4Q14765 748 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 ANKLE2Q86XL3 938 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 IRF7Q92985 503 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 MIPEPQ99797 713 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 ORAI3Q9BRQ5 295 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 PRDM14Q9GZV8 571 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
PRIM1-204ENST00000549549 FLT3P36888 993 aa12.1□□□□□ -0.47
PRIM1-204ENST00000549549 CYP4F3Q08477 520 aa12.1□□□□□ -0.47
PRIM1-204ENST00000549549 MTMR1Q13613 665 aa12.1□□□□□ -0.47
PRIM1-204ENST00000549549 FIBCD1Q8N539 461 aa12.1□□□□□ -0.47
PRIM1-204ENST00000549549 NOL6Q9H6R4 1146 aaKnown RBP12.1□□□□□ -0.47
PRIM1-204ENST00000549549 JMJD7P0C870 316 aa12.09□□□□□ -0.47
PRIM1-204ENST00000549549 STYK1Q6J9G0 422 aa12.09□□□□□ -0.47
PRIM1-204ENST00000549549 B4E1Z4 1266 aa12.08□□□□□ -0.48
PRIM1-204ENST00000549549 F8W735 103 aaPredicted RBP12.08□□□□□ -0.48
PRIM1-204ENST00000549549 SNRPB2P08579 225 aaKnown RBP12.08□□□□□ -0.48
PRIM1-204ENST00000549549 ELNP15502 786 aa12.08□□□□□ -0.48
PRIM1-204ENST00000549549 BPIP17213 487 aa12.08□□□□□ -0.48
PRIM1-204ENST00000549549 PPP2R5DQ14738 602 aa12.08□□□□□ -0.48
PRIM1-204ENST00000549549 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
PRIM1-204ENST00000549549 CDCA2Q69YH5 1023 aaPredicted RBP12.08□□□□□ -0.48
PRIM1-204ENST00000549549 LINC00114Q6XXX2 140 aa12.08□□□□□ -0.48
PRIM1-204ENST00000549549 CCAR1Q8IX12 1150 aaKnown RBP12.08□□□□□ -0.48
PRIM1-204ENST00000549549 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
PRIM1-204ENST00000549549 PCGF6Q9BYE7 350 aa12.08□□□□□ -0.48
PRIM1-204ENST00000549549 PUS7LQ9H0K6 701 aaKnown RBP12.08□□□□□ -0.48
PRIM1-204ENST00000549549 KIF3BO15066 747 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 KPNA6O60684 536 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 KCNJ6P48051 423 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 NEK2P51955 445 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 PPP2R5AQ15172 486 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 DENND5AQ6IQ26 1287 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 GPAT2Q6NUI2 795 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 UBE2R2Q712K3 238 aaPredicted RBP12.07□□□□□ -0.48
PRIM1-204ENST00000549549 ASXL2Q76L83 1435 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 SPATS2Q86XZ4 545 aaKnown RBP12.07□□□□□ -0.48
PRIM1-204ENST00000549549 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 PRDM10Q9NQV6 1147 aa12.07□□□□□ -0.48
PRIM1-204ENST00000549549 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
PRIM1-204ENST00000549549 TPD52L2O43399 206 aaKnown RBP12.06□□□□□ -0.48
PRIM1-204ENST00000549549 ZEB2O60315 1214 aa12.06□□□□□ -0.48
PRIM1-204ENST00000549549 APBA3O96018 575 aa12.06□□□□□ -0.48
PRIM1-204ENST00000549549 KCNA6P17658 529 aa12.06□□□□□ -0.48
PRIM1-204ENST00000549549 SNW1Q13573 536 aaKnown RBP12.06□□□□□ -0.48
PRIM1-204ENST00000549549 KIF18BQ86Y91 864 aa12.06□□□□□ -0.48
PRIM1-204ENST00000549549 KREMEN2Q8NCW0 462 aa12.06□□□□□ -0.48
PRIM1-204ENST00000549549 TTC1Q99614 292 aa12.06□□□□□ -0.48
PRIM1-204ENST00000549549 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
PRIM1-204ENST00000549549 AQP7O14520 342 aa12.05□□□□□ -0.48
PRIM1-204ENST00000549549 CRTAMO95727 393 aa12.05□□□□□ -0.48
PRIM1-204ENST00000549549 AMPD2Q01433 879 aa12.05□□□□□ -0.48
PRIM1-204ENST00000549549 TRIM28Q13263 835 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms