RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PRR13Q9NZ81 148 aa7.15□□□□□ -1.26
CCDC38-206ENST00000548771 MINPP1Q9UNW1 487 aa7.15□□□□□ -1.26
CCDC38-206ENST00000548771 SMG5Q9UPR3 1016 aaKnown RBP7.15□□□□□ -1.26
CCDC38-206ENST00000548771 NRDCO43847 1150 aa7.14□□□□□ -1.27
CCDC38-206ENST00000548771 VAMP1P23763 118 aa7.14□□□□□ -1.27
CCDC38-206ENST00000548771 RPL10P27635 214 aaKnown RBP7.14□□□□□ -1.27
CCDC38-206ENST00000548771 CTSKP43235 329 aa7.14□□□□□ -1.27
CCDC38-206ENST00000548771 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
CCDC38-206ENST00000548771 PCBP3P57721 371 aaKnown RBP7.14□□□□□ -1.27
CCDC38-206ENST00000548771 ZNF394Q53GI3 561 aa7.14□□□□□ -1.27
CCDC38-206ENST00000548771 CIAPIN1Q6FI81 312 aa7.14□□□□□ -1.27
CCDC38-206ENST00000548771 USP48Q86UV5 1035 aa7.14□□□□□ -1.27
CCDC38-206ENST00000548771 RBBP8NLQ8NC74 664 aaPredicted RBP7.14□□□□□ -1.27
CCDC38-206ENST00000548771 SYTL4Q96C24 671 aaPredicted RBP7.14□□□□□ -1.27
CCDC38-206ENST00000548771 SLC6A18Q96N87 628 aa7.14□□□□□ -1.27
CCDC38-206ENST00000548771 DDX41Q9UJV9 622 aaKnown RBP7.14□□□□□ -1.27
CCDC38-206ENST00000548771 SHOXO15266 292 aa7.13□□□□□ -1.27
CCDC38-206ENST00000548771 CHMP4BP1P59074 171 aa7.13□□□□□ -1.27
CCDC38-206ENST00000548771 ZPBP2Q6X784 338 aa7.13□□□□□ -1.27
CCDC38-206ENST00000548771 WAPLQ7Z5K2 1190 aa7.13□□□□□ -1.27
CCDC38-206ENST00000548771 KCNN1Q92952 543 aa7.13□□□□□ -1.27
CCDC38-206ENST00000548771 HHIPL1Q96JK4 782 aa7.13□□□□□ -1.27
CCDC38-206ENST00000548771 IRF2BPLQ9H1B7 796 aa7.13□□□□□ -1.27
CCDC38-206ENST00000548771 TCAF2A6NFQ2 919 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 FADS2P1A8MWK0 482 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 C9IYK1 514 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 NUAK1O60285 661 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 SYPP08247 313 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 AUHQ13825 339 aaKnown RBP7.12□□□□□ -1.27
CCDC38-206ENST00000548771 ANKRD39Q53RE8 183 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 GCM1Q9NP62 436 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 CHST7Q9NS84 486 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 SUCOQ9UBS9 1254 aaKnown RBP7.12□□□□□ -1.27
CCDC38-206ENST00000548771 GPR160Q9UJ42 338 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 PCDHGB7Q9Y5F8 929 aa7.12□□□□□ -1.27
CCDC38-206ENST00000548771 ZBTB7CA1YPR0 619 aa7.11□□□□□ -1.27
CCDC38-206ENST00000548771 USP2O75604 605 aaPredicted RBP7.11□□□□□ -1.27
CCDC38-206ENST00000548771 RECKO95980 971 aa7.11□□□□□ -1.27
CCDC38-206ENST00000548771 IMPDH2P12268 514 aa7.11□□□□□ -1.27
CCDC38-206ENST00000548771 GALK1P51570 392 aa7.11□□□□□ -1.27
CCDC38-206ENST00000548771 LINC00310P59036 64 aa7.11□□□□□ -1.27
CCDC38-206ENST00000548771 KRTAP5-3Q6L8H2 238 aa7.11□□□□□ -1.27
CCDC38-206ENST00000548771 METTL16Q86W50 562 aaKnown RBP7.11□□□□□ -1.27
CCDC38-206ENST00000548771 CRTAC1Q9NQ79 661 aa7.11□□□□□ -1.27
CCDC38-206ENST00000548771 ZNF205O95201 554 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 BMP8BP34820 402 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 C7orf61Q8IZ16 206 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 TMEM52Q8NDY8 209 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 RNF34Q969K3 372 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 RELTQ969Z4 430 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 FCRL2Q96LA5 508 aaPredicted RBP7.1□□□□□ -1.27
CCDC38-206ENST00000548771 DHRS1Q96LJ7 313 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 TNFRSF10DQ9UBN6 386 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 ZMYM5Q9UJ78 669 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 PCDHB12Q9Y5F1 795 aa7.1□□□□□ -1.27
CCDC38-206ENST00000548771 TEX51A0A1B0GUA7 166 aa7.09□□□□□ -1.27
CCDC38-206ENST00000548771 SEMA7AO75326 666 aa7.09□□□□□ -1.27
CCDC38-206ENST00000548771 PMS1P54277 932 aaKnown RBP7.09□□□□□ -1.27
CCDC38-206ENST00000548771 DLG4P78352 724 aa7.09□□□□□ -1.27
CCDC38-206ENST00000548771 PPFIBP1Q86W92 1011 aa7.09□□□□□ -1.27
CCDC38-206ENST00000548771 TM9SF2Q99805 663 aa7.09□□□□□ -1.27
CCDC38-206ENST00000548771 PLCD4Q9BRC7 762 aa7.09□□□□□ -1.27
CCDC38-206ENST00000548771 MKRN2Q9H000 416 aaKnown RBP7.09□□□□□ -1.27
CCDC38-206ENST00000548771 ERVK13-1Q9NX77 482 aa7.09□□□□□ -1.27
CCDC38-206ENST00000548771 GFOD1Q9NXC2 390 aa7.09□□□□□ -1.27
CCDC38-206ENST00000548771 HRKO00198 91 aa7.08□□□□□ -1.28
CCDC38-206ENST00000548771 FKTNO75072 461 aa7.08□□□□□ -1.28
CCDC38-206ENST00000548771 VAV1P15498 845 aa7.08□□□□□ -1.28
CCDC38-206ENST00000548771 PNLIPP16233 465 aa7.08□□□□□ -1.28
CCDC38-206ENST00000548771 ZYXQ15942 572 aaKnown RBP7.08□□□□□ -1.28
CCDC38-206ENST00000548771 RTP2Q5QGT7 225 aa7.08□□□□□ -1.28
CCDC38-206ENST00000548771 CEP128Q6ZU80 1094 aa7.08□□□□□ -1.28
CCDC38-206ENST00000548771 ZNF605Q86T29 641 aa7.08□□□□□ -1.28
CCDC38-206ENST00000548771 A0A0G2JLL6 359 aaPredicted RBP7.07□□□□□ -1.28
CCDC38-206ENST00000548771 SSU72P8A0A1W2PR75 194 aa7.07□□□□□ -1.28
CCDC38-206ENST00000548771 SCAMP3O14828 347 aaKnown RBP7.07□□□□□ -1.28
CCDC38-206ENST00000548771 BMP7P18075 431 aa7.07□□□□□ -1.28
CCDC38-206ENST00000548771 RTP1P59025 263 aa7.07□□□□□ -1.28
CCDC38-206ENST00000548771 YBX1P67809 324 aaKnown RBP7.07□□□□□ -1.28
CCDC38-206ENST00000548771 HSF5Q4G112 596 aaPredicted RBP7.07□□□□□ -1.28
CCDC38-206ENST00000548771 UNC5AQ6ZN44 842 aa7.07□□□□□ -1.28
CCDC38-206ENST00000548771 SLCO6A1Q86UG4 719 aa7.07□□□□□ -1.28
CCDC38-206ENST00000548771 SIRT2Q8IXJ6 389 aa7.07□□□□□ -1.28
CCDC38-206ENST00000548771 SMARCC1Q92922 1105 aaPredicted RBP7.07□□□□□ -1.28
CCDC38-206ENST00000548771 SRRTQ9BXP5 876 aaKnown RBP7.07□□□□□ -1.28
CCDC38-206ENST00000548771 FBXL21Q9UKT6 434 aa7.07□□□□□ -1.28
CCDC38-206ENST00000548771 PPT2Q9UMR5 302 aa7.07□□□□□ -1.28
CCDC38-206ENST00000548771 OR14I1A6ND48 311 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 GSNP06396 782 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 ENDOUP21128 410 aaKnown RBP7.06□□□□□ -1.28
CCDC38-206ENST00000548771 GUCY2CP25092 1073 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 PDE6BP35913 854 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 ERVFRD-1P60508 538 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 COL9A2Q14055 689 aaPredicted RBP7.06□□□□□ -1.28
CCDC38-206ENST00000548771 KIR3DS1Q14943 382 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 AXDND1Q5T1B0 1012 aaPredicted RBP7.06□□□□□ -1.28
CCDC38-206ENST00000548771 RUFY4Q6ZNE9 571 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 LSRQ86X29 649 aaPredicted RBP7.06□□□□□ -1.28
CCDC38-206ENST00000548771 RASGRP4Q8TDF6 673 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 PARD6AQ9NPB6 346 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms