RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 IGHA2P01877 340 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 HSPD1P10809 573 aaKnown RBP13.48□□□□□ -0.25
BEST3-209ENST00000548658 BMP3P12645 472 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 SDSP20132 328 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 CNGA1P29973 690 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 CYP2C19P33261 490 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 OAZ1P54368 228 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 CTDSPL2Q05D32 466 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 NMIQ13287 307 aaPredicted RBP13.48□□□□□ -0.25
BEST3-209ENST00000548658 HABP4Q5JVS0 413 aaKnown RBP13.48□□□□□ -0.25
BEST3-209ENST00000548658 VPS53Q5VIR6 699 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 LHX8Q68G74 356 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 REPS2Q8NFH8 660 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 GMCL1Q96IK5 515 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 NUP88Q99567 741 aaPredicted RBP13.48□□□□□ -0.25
BEST3-209ENST00000548658 DDX20Q9UHI6 824 aaKnown RBP13.48□□□□□ -0.25
BEST3-209ENST00000548658 NRBP1Q9UHY1 535 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 SLC1A4P43007 532 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 STAT2P52630 851 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 FAM160B2Q86V87 743 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 LRRC47Q8N1G4 583 aaKnown RBP13.47□□□□□ -0.25
BEST3-209ENST00000548658 ARRDC4Q8NCT1 418 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 DIS3LQ8TF46 1054 aaKnown RBP13.47□□□□□ -0.25
BEST3-209ENST00000548658 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 MAML3Q96JK9 1138 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 RNF41Q9H4P4 317 aaPredicted RBP13.47□□□□□ -0.25
BEST3-209ENST00000548658 SLC38A10Q9HBR0 1119 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 DIAPH3Q9NSV4 1193 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 FBXO40Q9UH90 709 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 ZNF236Q9UL36 1845 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
BEST3-209ENST00000548658 PARP14Q460N5 1801 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 SEPT4O43236 478 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 PLA2G6O60733 806 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 CYBAP13498 195 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
BEST3-209ENST00000548658 SNRNP48Q6IEG0 339 aaKnown RBP13.46□□□□□ -0.25
BEST3-209ENST00000548658 MFSD6Q6ZSS7 791 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 CPXCR1Q8N123 301 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.25
BEST3-209ENST00000548658 STAG1Q8WVM7 1258 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 DDX11Q96FC9 970 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 IL17RBQ9NRM6 502 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 TCP11L1Q9NUJ3 509 aa13.46□□□□□ -0.25
BEST3-209ENST00000548658 ISY1Q9ULR0 285 aaKnown RBP13.46□□□□□ -0.25
BEST3-209ENST00000548658 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.25
BEST3-209ENST00000548658 TMEM232C9JQI7 657 aa13.45□□□□□ -0.26
BEST3-209ENST00000548658 ZNF213O14771 459 aa13.45□□□□□ -0.26
BEST3-209ENST00000548658 MCCP23508 829 aa13.45□□□□□ -0.26
BEST3-209ENST00000548658 NOVP48745 357 aa13.45□□□□□ -0.26
BEST3-209ENST00000548658 IKQ13123 557 aaPredicted RBP13.45□□□□□ -0.26
BEST3-209ENST00000548658 RCSD1Q6JBY9 416 aa13.45□□□□□ -0.26
BEST3-209ENST00000548658 CWC27Q6UX04 472 aaKnown RBP13.45□□□□□ -0.26
BEST3-209ENST00000548658 ZNF589Q86UQ0 364 aaPredicted RBP13.45□□□□□ -0.26
BEST3-209ENST00000548658 CHST13Q8NET6 341 aa13.45□□□□□ -0.26
BEST3-209ENST00000548658 TTC14Q96N46 770 aa13.45□□□□□ -0.26
BEST3-209ENST00000548658 TINF2Q9BSI4 451 aa13.45□□□□□ -0.26
BEST3-209ENST00000548658 COL11A1P12107 1806 aaPredicted RBP13.44□□□□□ -0.26
BEST3-209ENST00000548658 DNM1LO00429 736 aa13.44□□□□□ -0.26
BEST3-209ENST00000548658 COL6A1P12109 1028 aa13.44□□□□□ -0.26
BEST3-209ENST00000548658 ZNF792Q3KQV3 632 aa13.44□□□□□ -0.26
BEST3-209ENST00000548658 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
BEST3-209ENST00000548658 AKNAD1Q5T1N1 836 aa13.44□□□□□ -0.26
BEST3-209ENST00000548658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.44□□□□□ -0.26
BEST3-209ENST00000548658 INCENPQ9NQS7 918 aa13.44□□□□□ -0.26
BEST3-209ENST00000548658 CTNNA3Q9UI47 895 aa13.44□□□□□ -0.26
BEST3-209ENST00000548658 CNPY2Q9Y2B0 182 aa13.44□□□□□ -0.26
BEST3-209ENST00000548658 ZNFX1Q9P2E3 1918 aaKnown RBP13.43□□□□□ -0.26
BEST3-209ENST00000548658 NMT2O60551 498 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 PGK2P07205 417 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 TOP1P11387 765 aaKnown RBP13.43□□□□□ -0.26
BEST3-209ENST00000548658 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 TKFCQ3LXA3 575 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 CCDC178Q5BJE1 867 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 CHRDL2Q6WN34 429 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 ZNF467Q7Z7K2 595 aaPredicted RBP13.43□□□□□ -0.26
BEST3-209ENST00000548658 ANKRD35Q8N283 1001 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 TRPV1Q8NER1 839 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 DCAF4Q8WV16 495 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 ESR2Q92731 530 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 RAVER2Q9HCJ3 691 aaKnown RBP13.43□□□□□ -0.26
BEST3-209ENST00000548658 RIPK3Q9Y572 518 aa13.43□□□□□ -0.26
BEST3-209ENST00000548658 A0A1W2PPC1 479 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 KBTBD13C9JR72 458 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 HAND2P61296 217 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 IMMTQ16891 758 aaKnown RBP13.42□□□□□ -0.26
BEST3-209ENST00000548658 MAMDC4Q6UXC1 1216 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 C7orf61Q8IZ16 206 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 DSCC1Q9BVC3 393 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 SENP6Q9GZR1 1112 aaPredicted RBP13.42□□□□□ -0.26
BEST3-209ENST00000548658 PNMA2Q9UL42 364 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 CEP290O15078 2479 aa13.42□□□□□ -0.26
BEST3-209ENST00000548658 PFASO15067 1338 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 SYNGAP1Q96PV0 1343 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 DNAJC25-GNG10A0A024R161 153 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 RARBP10826 455 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 PRAMEF19Q5SWL8 479 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms