RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ALG1Q9BT22 464 aa33.3■■■□□ 2.92
BRF1-213ENST00000548421 VAT1LQ9HCJ6 419 aa33.3■■■□□ 2.92
BRF1-213ENST00000548421 PARP14Q460N5 1801 aa33.29■■■□□ 2.92
BRF1-213ENST00000548421 PKN1Q16512 942 aa33.29■■■□□ 2.92
BRF1-213ENST00000548421 SYDE2Q5VT97 1194 aa33.29■■■□□ 2.92
BRF1-213ENST00000548421 FAM160B2Q86V87 743 aa33.29■■■□□ 2.92
BRF1-213ENST00000548421 PIBF1Q8WXW3 757 aa33.29■■■□□ 2.92
BRF1-213ENST00000548421 WNK4Q96J92 1243 aa33.29■■■□□ 2.92
BRF1-213ENST00000548421 RPAP3Q9H6T3 665 aaPredicted RBP33.29■■■□□ 2.92
BRF1-213ENST00000548421 JMJD4Q9H9V9 463 aa33.29■■■□□ 2.92
BRF1-213ENST00000548421 SEC63Q9UGP8 760 aaKnown RBP33.29■■■□□ 2.92
BRF1-213ENST00000548421 PDIA4P13667 645 aaKnown RBP33.28■■■□□ 2.92
BRF1-213ENST00000548421 GJA5P36382 358 aa33.28■■■□□ 2.92
BRF1-213ENST00000548421 PFKFB3Q16875 520 aaPredicted RBP33.28■■■□□ 2.92
BRF1-213ENST00000548421 CHMP5Q9NZZ3 219 aa33.28■■■□□ 2.92
BRF1-213ENST00000548421 HOMER1Q86YM7 354 aa33.27■■■□□ 2.92
BRF1-213ENST00000548421 AIFM3Q96NN9 605 aa33.27■■■□□ 2.92
BRF1-213ENST00000548421 PIGSQ96S52 555 aa33.27■■■□□ 2.92
BRF1-213ENST00000548421 TANGO6Q9C0B7 1094 aa33.27■■■□□ 2.92
BRF1-213ENST00000548421 STX6O43752 255 aa33.26■■■□□ 2.92
BRF1-213ENST00000548421 SCG2P13521 617 aa33.26■■■□□ 2.92
BRF1-213ENST00000548421 SAPCD2Q86UD0 394 aa33.26■■■□□ 2.92
BRF1-213ENST00000548421 PROCA1Q8NCQ7 364 aaPredicted RBP33.26■■■□□ 2.92
BRF1-213ENST00000548421 MTMR8Q96EF0 704 aa33.26■■■□□ 2.92
BRF1-213ENST00000548421 C8orf76Q96K31 380 aa33.26■■■□□ 2.92
BRF1-213ENST00000548421 NUCB2P80303 420 aa33.25■■■□□ 2.91
BRF1-213ENST00000548421 PRR12Q9ULL5 1215 aa33.25■■■□□ 2.91
BRF1-213ENST00000548421 SNAPC2Q13487 334 aa33.25■■■□□ 2.91
BRF1-213ENST00000548421 SLF1Q9BQI6 1058 aa33.25■■■□□ 2.91
BRF1-213ENST00000548421 H3BQV1 296 aa33.24■■■□□ 2.91
BRF1-213ENST00000548421 ZBTB48P10074 688 aaPredicted RBP33.24■■■□□ 2.91
BRF1-213ENST00000548421 FOSBP53539 338 aa33.24■■■□□ 2.91
BRF1-213ENST00000548421 PKP1Q13835 747 aa33.24■■■□□ 2.91
BRF1-213ENST00000548421 IFFO2Q5TF58 517 aa33.24■■■□□ 2.91
BRF1-213ENST00000548421 RGS22Q8NE09 1264 aa33.24■■■□□ 2.91
BRF1-213ENST00000548421 KIFC2Q96AC6 838 aa33.24■■■□□ 2.91
BRF1-213ENST00000548421 FBXO28Q9NVF7 368 aa33.24■■■□□ 2.91
BRF1-213ENST00000548421 RLFQ13129 1914 aa33.23■■■□□ 2.91
BRF1-213ENST00000548421 PNMA6FA0A0J9YX94 578 aa33.23■■■□□ 2.91
BRF1-213ENST00000548421 ZBTB5O15062 677 aa33.23■■■□□ 2.91
BRF1-213ENST00000548421 FLOT1O75955 427 aa33.23■■■□□ 2.91
BRF1-213ENST00000548421 XBP1P17861 261 aa33.23■■■□□ 2.91
BRF1-213ENST00000548421 TRIM29Q14134 588 aa33.23■■■□□ 2.91
BRF1-213ENST00000548421 GADL1Q6ZQY3 521 aa33.23■■■□□ 2.91
BRF1-213ENST00000548421 TLL2Q9Y6L7 1015 aa33.23■■■□□ 2.91
BRF1-213ENST00000548421 VPS37CA5D8V6 355 aaPredicted RBP33.22■■■□□ 2.91
BRF1-213ENST00000548421 TMEM88BA6NKF7 163 aa33.22■■■□□ 2.91
BRF1-213ENST00000548421 CDC37Q16543 378 aaPredicted RBP33.22■■■□□ 2.91
BRF1-213ENST00000548421 SPRYD7Q5W111 196 aa33.22■■■□□ 2.91
BRF1-213ENST00000548421 FASTKD5Q7L8L6 764 aaKnown RBP33.22■■■□□ 2.91
BRF1-213ENST00000548421 PRPF38AQ8NAV1 312 aaKnown RBP33.22■■■□□ 2.91
BRF1-213ENST00000548421 FBXO18Q8NFZ0 1043 aa33.22■■■□□ 2.91
BRF1-213ENST00000548421 WDR33Q9C0J8 1336 aaKnown RBP33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L15C9J2P7 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L13C9JLJ4 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L11C9JVI0 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L18D6R9N7 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L22D6RA61 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L17D6RBQ6 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L19D6RCP7 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L20D6RJB6 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 USP17L24Q0WX57 530 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 MTMR6Q9Y217 621 aa33.21■■■□□ 2.91
BRF1-213ENST00000548421 hCG_1984214I3L0E3 225 aa33.2■■■□□ 2.91
BRF1-213ENST00000548421 GTF2A2P52657 109 aa33.2■■■□□ 2.91
BRF1-213ENST00000548421 TREML2Q5T2D2 321 aa33.2■■■□□ 2.91
BRF1-213ENST00000548421 CATSPERGQ6ZRH7 1159 aa33.2■■■□□ 2.91
BRF1-213ENST00000548421 HEATR3Q7Z4Q2 680 aa33.2■■■□□ 2.91
BRF1-213ENST00000548421 ZNF713Q8N859 430 aaPredicted RBP33.2■■■□□ 2.91
BRF1-213ENST00000548421 GJB4Q9NTQ9 266 aa33.2■■■□□ 2.91
BRF1-213ENST00000548421 PPP1R9AQ9ULJ8 1098 aa33.2■■■□□ 2.91
BRF1-213ENST00000548421 BRD1O95696 1058 aa33.19■■■□□ 2.9
BRF1-213ENST00000548421 ZNF157P51786 506 aaPredicted RBP33.19■■■□□ 2.9
BRF1-213ENST00000548421 QRICH1Q2TAL8 776 aa33.19■■■□□ 2.9
BRF1-213ENST00000548421 WWC2Q6AWC2 1192 aa33.19■■■□□ 2.9
BRF1-213ENST00000548421 RGMBQ6NW40 437 aa33.19■■■□□ 2.9
BRF1-213ENST00000548421 GPKOWQ92917 476 aaPredicted RBP eCLIP33.19■■■□□ 2.9
BRF1-213ENST00000548421 RANBP17Q9H2T7 1088 aaKnown RBP33.19■■■□□ 2.9
BRF1-213ENST00000548421 SH3GLB2Q9NR46 395 aa33.19■■■□□ 2.9
BRF1-213ENST00000548421 BARHL2Q9NY43 387 aa33.19■■■□□ 2.9
BRF1-213ENST00000548421 VPS54Q9P1Q0 977 aa33.19■■■□□ 2.9
BRF1-213ENST00000548421 GUCY1B3Q02153 619 aa33.18■■■□□ 2.9
BRF1-213ENST00000548421 MOGSQ13724 837 aa33.18■■■□□ 2.9
BRF1-213ENST00000548421 KRT40Q6A162 431 aa33.18■■■□□ 2.9
BRF1-213ENST00000548421 SAMD1Q6SPF0 538 aaPredicted RBP33.18■■■□□ 2.9
BRF1-213ENST00000548421 RASAL3Q86YV0 1011 aa33.18■■■□□ 2.9
BRF1-213ENST00000548421 ABT1Q9ULW3 272 aaKnown RBP33.18■■■□□ 2.9
BRF1-213ENST00000548421 AGTPBP1Q9UPW5 1226 aa33.18■■■□□ 2.9
BRF1-213ENST00000548421 CETPP11597 493 aa33.18■■■□□ 2.9
BRF1-213ENST00000548421 MKRN3Q13064 507 aaKnown RBP33.18■■■□□ 2.9
BRF1-213ENST00000548421 OTUD7BQ6GQQ9 843 aa33.18■■■□□ 2.9
BRF1-213ENST00000548421 STXBP3O00186 592 aa33.17■■■□□ 2.9
BRF1-213ENST00000548421 ZSCAN22P10073 491 aaPredicted RBP33.17■■■□□ 2.9
BRF1-213ENST00000548421 HOXA7P31268 230 aaPredicted RBP33.17■■■□□ 2.9
BRF1-213ENST00000548421 COG2Q14746 738 aa33.17■■■□□ 2.9
BRF1-213ENST00000548421 FAM177A1Q8N128 213 aaPredicted RBP33.17■■■□□ 2.9
BRF1-213ENST00000548421 MS4A4AQ96JQ5 239 aa33.17■■■□□ 2.9
BRF1-213ENST00000548421 ZDHHC9Q9Y397 364 aa33.17■■■□□ 2.9
BRF1-213ENST00000548421 MYPNQ86TC9 1320 aa33.16■■■□□ 2.9
BRF1-213ENST00000548421 SNAP25P60880 206 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms