RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 STARD7Q9NQZ5 370 aa14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 CLIP2Q9UDT6 1046 aa14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 GREB1LQ9C091 1923 aaPredicted RBP14.33□□□□□ -0.12
TRAFD1-205ENST00000548277 MYADML2A6NDP7 307 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 F5H6K3 240 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 PRDM1O75626 825 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 FOSL2P15408 326 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 SMAD3P84022 425 aaKnown RBP14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 KLRC3Q07444 240 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 KCNA10Q16322 511 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 C1orf53Q5VUE5 145 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 KIFC2Q96AC6 838 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 STRBPQ96SI9 672 aaKnown RBP14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 LRRCC1Q9C099 1032 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 FAM184BQ9ULE4 1060 aa14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 DIS3Q9Y2L1 958 aaKnown RBP14.32□□□□□ -0.12
TRAFD1-205ENST00000548277 GSG1L2A8MUP6 293 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 DCDC2CA8MYV0 355 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 ADAMTS4O75173 837 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 SNAI1O95863 264 aaPredicted RBP14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 APPP05067 770 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 RASA1P20936 1047 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 ACLYP53396 1101 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 FPGSQ05932 587 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 FAAP100Q0VG06 881 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 TSHZ3Q63HK5 1081 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 NRBP1Q9UHY1 535 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 A0A0C4DFX4 3053 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 SYNRGQ9UMZ2 1314 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 UNC80Q8N2C7 3258 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 GBF1Q92538 1859 aa14.31□□□□□ -0.12
TRAFD1-205ENST00000548277 LAMA2P24043 3122 aaKnown RBP14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 KIAA0355O15063 1070 aa14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 ZBED4O75132 1171 aa14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 NDUFB10O96000 172 aa14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 C6orf222P0C671 652 aaPredicted RBP14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 C20orf194Q5TEA3 1177 aa14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 ZNF444Q8N0Y2 327 aaPredicted RBP14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 ANKRD35Q8N283 1001 aa14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 OSBP2Q969R2 916 aa14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 TEX13BQ9BXU2 312 aa14.3□□□□□ -0.12
TRAFD1-205ENST00000548277 COPB2P35606 906 aa14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 TDO2P48775 406 aa14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 ACVR2BQ13705 512 aa14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 GRIN2CQ14957 1233 aa14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 LRRC47Q8N1G4 583 aaKnown RBP14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 PRPF38AQ8NAV1 312 aaKnown RBP14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 PPM1EQ8WY54 764 aa14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 HOMER2Q9NSB8 354 aa14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 NYAP2Q9P242 653 aa14.29□□□□□ -0.12
TRAFD1-205ENST00000548277 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 GRXCR1A8MXD5 290 aa14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 ASGR1P07306 291 aa14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 NOL8Q76FK4 1167 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 KLHDC9Q8NEP7 349 aa14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.28□□□□□ -0.127e-6■■□□□ 12.2
TRAFD1-205ENST00000548277 TSEN34Q9BSV6 310 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 PPP1R12CQ9BZL4 782 aa14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 ECHDC1Q9NTX5 307 aa14.28□□□□□ -0.12
TRAFD1-205ENST00000548277 DNAJC25-GNG10A0A024R161 153 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 M0R2C6 588 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 RNF113AO15541 343 aaKnown RBP14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 ADCY6O43306 1168 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 DUSP11O75319 330 aaKnown RBP14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 TIMP1P01033 207 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 ACRP10323 421 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 BEX3Q00994 111 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 CNTN2Q02246 1040 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 CCDC144BQ3MJ40 725 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 GNASQ5JWF2 1037 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 CCDC129Q6ZRS4 1044 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 CEP95Q96GE4 821 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 GLT1D1Q96MS3 346 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 EYSQ5T1H1 3165 aa14.27□□□□□ -0.13
TRAFD1-205ENST00000548277 SYNGAP1Q96PV0 1343 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 MOXD2PA6NHM9 499 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 GPAA1O43292 621 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 DNAJB2P25686 324 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 SNAP25P60880 206 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 IKQ13123 557 aaPredicted RBP14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 SLFN13Q68D06 897 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 CCSAPQ6IQ19 270 aaPredicted RBP14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 MAMDC4Q6UXC1 1216 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 ANKRD33Q7Z3H0 272 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 KBTBD3Q8NAB2 608 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 APPBP2Q92624 585 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 TOX2Q96NM4 488 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 SEC62Q99442 399 aaKnown RBP14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 EPB41L4AQ9HCS5 686 aaPredicted RBP14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 FEM1BQ9UK73 627 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 RCAN3Q9UKA8 241 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms