RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 FUT2Q10981 343 aa19.92■□□□□ 0.78
KRT4-201ENST00000548097 CATSPERGQ6ZRH7 1159 aa19.92■□□□□ 0.78
KRT4-201ENST00000548097 FASTKD5Q7L8L6 764 aaKnown RBP19.92■□□□□ 0.78
KRT4-201ENST00000548097 ADGRF4Q8IZF3 695 aa19.92■□□□□ 0.78
KRT4-201ENST00000548097 KIF23Q02241 960 aaPredicted RBP19.92■□□□□ 0.78
KRT4-201ENST00000548097 HOMER1Q86YM7 354 aa19.92■□□□□ 0.78
KRT4-201ENST00000548097 NSUN7Q8NE18 718 aaKnown RBP19.92■□□□□ 0.78
KRT4-201ENST00000548097 SLC26A6Q9BXS9 759 aa19.92■□□□□ 0.78
KRT4-201ENST00000548097 PRR12Q9ULL5 1215 aa19.92■□□□□ 0.78
KRT4-201ENST00000548097 CNTNAP5Q8WYK1 1306 aa19.91■□□□□ 0.78
KRT4-201ENST00000548097 CCDC196A0A1B0GTZ2 297 aa19.91■□□□□ 0.78
KRT4-201ENST00000548097 IGF2BP3O00425 579 aaKnown RBP eCLIP19.91■□□□□ 0.78
KRT4-201ENST00000548097 CYP2C8P10632 490 aa19.91■□□□□ 0.78
KRT4-201ENST00000548097 TAL1P17542 331 aaPredicted RBP19.91■□□□□ 0.78
KRT4-201ENST00000548097 CUL4AQ13619 759 aa19.91■□□□□ 0.78
KRT4-201ENST00000548097 JMJD4Q9H9V9 463 aa19.91■□□□□ 0.78
KRT4-201ENST00000548097 PTPDC1A2A3K4 754 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L15C9J2P7 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L13C9JLJ4 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L11C9JVI0 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L18D6R9N7 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L22D6RA61 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L17D6RBQ6 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L19D6RCP7 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L20D6RJB6 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 PDHXO00330 501 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 VEGFBP49765 207 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 USP17L24Q0WX57 530 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 BECN1Q14457 450 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 SYDE2Q5VT97 1194 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 ATG4CQ96DT6 458 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 PIGSQ96S52 555 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 FEM1BQ9UK73 627 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 V9GY48 417 aaPredicted RBP19.9■□□□□ 0.78
KRT4-201ENST00000548097 PARP14Q460N5 1801 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 RLFQ13129 1914 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 MANSC4A6NHS7 340 aaPredicted RBP19.9■□□□□ 0.78
KRT4-201ENST00000548097 GNAQP50148 359 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 P2RX7Q99572 595 aaKnown RBP19.9■□□□□ 0.78
KRT4-201ENST00000548097 SLF1Q9BQI6 1058 aa19.9■□□□□ 0.78
KRT4-201ENST00000548097 ASCC2Q9H1I8 757 aaPredicted RBP19.9■□□□□ 0.78
KRT4-201ENST00000548097 IFNAR1P17181 557 aa19.89■□□□□ 0.77
KRT4-201ENST00000548097 FOSBP53539 338 aa19.89■□□□□ 0.77
KRT4-201ENST00000548097 PPP2R5BQ15173 497 aa19.89■□□□□ 0.77
KRT4-201ENST00000548097 POTEEQ6S8J3 1075 aa19.89■□□□□ 0.77
KRT4-201ENST00000548097 BTNL9Q6UXG8 535 aa19.89■□□□□ 0.77
KRT4-201ENST00000548097 AIFM3Q96NN9 605 aa19.89■□□□□ 0.77
KRT4-201ENST00000548097 RIOX1Q9H6W3 641 aa19.89■□□□□ 0.77
KRT4-201ENST00000548097 PPP1R9AQ9ULJ8 1098 aa19.89■□□□□ 0.77
KRT4-201ENST00000548097 WDR33Q9C0J8 1336 aaKnown RBP19.89■□□□□ 0.77
KRT4-201ENST00000548097 TESPA1A2RU30 521 aaPredicted RBP19.88■□□□□ 0.77
KRT4-201ENST00000548097 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
KRT4-201ENST00000548097 FDPSP14324 419 aaKnown RBP19.88■□□□□ 0.77
KRT4-201ENST00000548097 HSPA6P17066 643 aa19.88■□□□□ 0.77
KRT4-201ENST00000548097 HOXA7P31268 230 aaPredicted RBP19.88■□□□□ 0.77
KRT4-201ENST00000548097 IRX3P78415 501 aaPredicted RBP19.88■□□□□ 0.77
KRT4-201ENST00000548097 COG2Q14746 738 aa19.88■□□□□ 0.77
KRT4-201ENST00000548097 CCDC174Q6PII3 467 aa19.88■□□□□ 0.77
KRT4-201ENST00000548097 CHURC1Q8WUH1 139 aa19.88■□□□□ 0.77
KRT4-201ENST00000548097 SPDYE16A6NNV3 312 aaPredicted RBP19.88■□□□□ 0.77
KRT4-201ENST00000548097 DSG3P32926 999 aa19.88■□□□□ 0.77
KRT4-201ENST00000548097 SSRP1Q08945 709 aaKnown RBP19.88■□□□□ 0.77
KRT4-201ENST00000548097 FAM160B2Q86V87 743 aa19.88■□□□□ 0.77
KRT4-201ENST00000548097 PRPF38AQ8NAV1 312 aaKnown RBP19.88■□□□□ 0.77
KRT4-201ENST00000548097 SPZ1Q9BXG8 430 aa19.88■□□□□ 0.77
KRT4-201ENST00000548097 NOGQ13253 232 aa19.87■□□□□ 0.77
KRT4-201ENST00000548097 CDC37Q16543 378 aaPredicted RBP19.87■□□□□ 0.77
KRT4-201ENST00000548097 CPLX2Q6PUV4 134 aaKnown RBP19.87■□□□□ 0.77
KRT4-201ENST00000548097 ANKRD23Q86SG2 305 aa19.87■□□□□ 0.77
KRT4-201ENST00000548097 LZTS2Q9BRK4 669 aa19.87■□□□□ 0.77
KRT4-201ENST00000548097 GJB4Q9NTQ9 266 aa19.87■□□□□ 0.77
KRT4-201ENST00000548097 CEP350Q5VT06 3117 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 PPP1R11O60927 126 aaPredicted RBP19.86■□□□□ 0.77
KRT4-201ENST00000548097 FMNL1O95466 1100 aaPredicted RBP19.86■□□□□ 0.77
KRT4-201ENST00000548097 GJB2P29033 226 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 PKN1Q16512 942 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 QRICH1Q2TAL8 776 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 IFNL1Q8IU54 200 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 CPXCR1Q8N123 301 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 SMARCC2Q8TAQ2 1214 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 GPKOWQ92917 476 aaPredicted RBP eCLIP19.86■□□□□ 0.77
KRT4-201ENST00000548097 ORC3Q9UBD5 711 aaPredicted RBP19.86■□□□□ 0.77
KRT4-201ENST00000548097 COL11A1P12107 1806 aaPredicted RBP19.86■□□□□ 0.77
KRT4-201ENST00000548097 VWA5AO00534 786 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 CDKL5O76039 1030 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 HERVK_113P62684 666 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 RRP36Q96EU6 259 aaKnown RBP19.86■□□□□ 0.77
KRT4-201ENST00000548097 SMC3Q9UQE7 1217 aa19.86■□□□□ 0.77
KRT4-201ENST00000548097 PRPF3O43395 683 aaKnown RBP19.85■□□□□ 0.77
KRT4-201ENST00000548097 PLA2G6O60733 806 aa19.85■□□□□ 0.77
KRT4-201ENST00000548097 OSBPP22059 807 aa19.85■□□□□ 0.77
KRT4-201ENST00000548097 USH1GQ495M9 461 aa19.85■□□□□ 0.77
KRT4-201ENST00000548097 LLPHQ9BRT6 129 aaKnown RBP19.85■□□□□ 0.77
KRT4-201ENST00000548097 PAGR1Q9BTK6 254 aa19.85■□□□□ 0.77
KRT4-201ENST00000548097 RNF26Q9BY78 433 aaPredicted RBP19.85■□□□□ 0.77
KRT4-201ENST00000548097 RAVER2Q9HCJ3 691 aaKnown RBP19.85■□□□□ 0.77
KRT4-201ENST00000548097 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.85■□□□□ 0.77
KRT4-201ENST00000548097 MYH6P13533 1939 aa19.85■□□□□ 0.77
KRT4-201ENST00000548097 SMCHD1A6NHR9 2005 aa19.84■□□□□ 0.77
KRT4-201ENST00000548097 ZBTB5O15062 677 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms