RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CYP2C19P33261 490 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 GRB14Q14449 540 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 GIMAP6Q6P9H5 292 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 C7orf61Q8IZ16 206 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 MB21D1Q8N884 522 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 PI4K2BQ8TCG2 481 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 KCTD12Q96CX2 325 aaKnown RBP8.01□□□□□ -1.13
SCAF11-211ENST00000547950 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCAF11-211ENST00000547950 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 FBXO28Q9NVF7 368 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 CLIP2Q9UDT6 1046 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 STAP2Q9UGK3 403 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 OGDHLQ9ULD0 1010 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 PHIPQ8WWQ0 1821 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 TTC41PQ6P2S7 1318 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 MAST2Q6P0Q8 1798 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 F5H6K3 240 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 WDR46O15213 610 aaKnown RBP8□□□□□ -1.13
SCAF11-211ENST00000547950 COBLO75128 1261 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 HOXC6P09630 235 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 MX1P20591 662 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 SLC4A3P48751 1232 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 FXR1P51114 621 aaKnown RBP eCLIP8□□□□□ -1.13
SCAF11-211ENST00000547950 FOSBP53539 338 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 KLRC3Q07444 240 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 TMEM132BQ14DG7 1078 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 FAM83BQ5T0W9 1011 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 IFNL3Q8IZI9 196 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 NUP88Q99567 741 aaPredicted RBP8□□□□□ -1.13
SCAF11-211ENST00000547950 NACAP1Q9BZK3 213 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 MROH8Q9H579 483 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 EPB41L4AQ9HCS5 686 aaPredicted RBP8□□□□□ -1.13
SCAF11-211ENST00000547950 ZMYND8Q9ULU4 1186 aaPredicted RBP8□□□□□ -1.13
SCAF11-211ENST00000547950 SIPA1L1O43166 1804 aa8□□□□□ -1.13
SCAF11-211ENST00000547950 VWA5AO00534 786 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 FCER1AP12319 257 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 SYN1P17600 705 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 STAT3P40763 770 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 FAM47AQ5JRC9 791 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 PRAMEF19Q5SWL8 479 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 B4GALNT3Q6L9W6 998 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 CCDC129Q6ZRS4 1044 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 SHCBP1Q8NEM2 672 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 TRPV1Q8NER1 839 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 CHMP4CQ96CF2 233 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 NAPBQ9H115 298 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 ZNF287Q9HBT7 754 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 SLC5A4Q9NY91 659 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 NYAP2Q9P242 653 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 DDX20Q9UHI6 824 aaKnown RBP7.99□□□□□ -1.13
SCAF11-211ENST00000547950 ADAMTS5Q9UNA0 930 aa7.99□□□□□ -1.13
SCAF11-211ENST00000547950 MKI67P46013 3256 aaKnown RBP7.99□□□□□ -1.13
SCAF11-211ENST00000547950 LOC285556D6RIA3 1793 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 SLC25A27O95847 323 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 NDUFB10O96000 172 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 PGK2P07205 417 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 SLC3A2P08195 630 aaKnown RBP7.98□□□□□ -1.13
SCAF11-211ENST00000547950 TFAP4Q01664 338 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 PDE4BQ07343 736 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 KCTD2Q14681 263 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 MFSD10Q14728 455 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 ZMYM1Q5SVZ6 1142 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 ANO1Q5XXA6 986 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 ABRAQ8N0Z2 381 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 PRPF38AQ8NAV1 312 aaKnown RBP7.98□□□□□ -1.13
SCAF11-211ENST00000547950 CEP95Q96GE4 821 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 MMP19Q99542 508 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 SLF1Q9BQI6 1058 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 SENP6Q9GZR1 1112 aaPredicted RBP7.98□□□□□ -1.13
SCAF11-211ENST00000547950 INCENPQ9NQS7 918 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 MTMR4Q9NYA4 1195 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 PLA2G2EQ9NZK7 142 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 PPP1R9AQ9ULJ8 1098 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 ISY1Q9ULR0 285 aaKnown RBP7.98□□□□□ -1.13
SCAF11-211ENST00000547950 VPS9D1Q9Y2B5 631 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 CTDP1Q9Y5B0 961 aaPredicted RBP7.98□□□□□ -1.13
SCAF11-211ENST00000547950 BRCA2P51587 3418 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 PFASO15067 1338 aa7.98□□□□□ -1.13
SCAF11-211ENST00000547950 MYO5AQ9Y4I1 1855 aaKnown RBP7.98□□□□□ -1.13
SCAF11-211ENST00000547950 IGKV6D-41A0A0C4DH26 115 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 MSCO60682 206 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 ZBED4O75132 1171 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 TTLL1O95922 423 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 TSPY3P0CV98 308 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 TSPY8P0CW00 308 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 COL6A1P12109 1028 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 CYBAP13498 195 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 PDE1AP54750 535 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 CTDSPL2Q05D32 466 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 PPARAQ07869 468 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 HDAC1Q13547 482 aaPredicted RBP7.97□□□□□ -1.13
SCAF11-211ENST00000547950 LRRC26Q2I0M4 334 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 GJC2Q5T442 439 aaPredicted RBP7.97□□□□□ -1.13
SCAF11-211ENST00000547950 OLFML2BQ68BL8 750 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 RIOX2Q8IUF8 465 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 CPXCR1Q8N123 301 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 LRRC47Q8N1G4 583 aaKnown RBP7.97□□□□□ -1.13
SCAF11-211ENST00000547950 ARRDC4Q8NCT1 418 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 MKL1Q969V6 931 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 KIFC2Q96AC6 838 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms