RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 ADALQ6DHV7 355 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 KCNG4Q8TDN1 519 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 ZNF341Q9BYN7 854 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 SAGE1Q9NXZ1 904 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 TAOK2Q9UL54 1235 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 MRVI1Q9Y6F6 885 aa19.05■□□□□ 0.64
CHMP1A-204ENST00000547687 SREBF2Q12772 1141 aa19.04■□□□□ 0.64
CHMP1A-204ENST00000547687 ZSCAN30Q86W11 494 aa19.04■□□□□ 0.64
CHMP1A-204ENST00000547687 TRIM22Q8IYM9 498 aa19.04■□□□□ 0.64
CHMP1A-204ENST00000547687 FSIP1Q8NA03 581 aa19.04■□□□□ 0.64
CHMP1A-204ENST00000547687 USP25Q9UHP3 1055 aa19.04■□□□□ 0.64
CHMP1A-204ENST00000547687 HTTP42858 3142 aa19.04■□□□□ 0.64
CHMP1A-204ENST00000547687 SPTLC2O15270 562 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 ENTPD3O75355 529 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 SNW1Q13573 536 aaKnown RBP19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 ANO1Q5XXA6 986 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 SASS6Q6UVJ0 657 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 DGKHQ86XP1 1220 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 CMTR1Q8N1G2 835 aaKnown RBP19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 TCP11L1Q9NUJ3 509 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 SERPINB13Q9UIV8 391 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 MYH8P13535 1937 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 ATRNL1Q5VV63 1379 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 SIPA1L1O43166 1804 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 A0A1W2PQ27 194 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 A0A1W2PQ64 194 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 A0A1W2PQD8 194 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 CTAGE5O15320 804 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 FAM160A1Q05DH4 1040 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 REM2Q8IYK8 340 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 CCDC82Q8N4S0 544 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 CRACR2BQ8N4Y2 399 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 ENGASEQ8NFI3 743 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 HOOK2Q96ED9 719 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 PTPN18Q99952 460 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 CCDC39Q9UFE4 941 aa19.03■□□□□ 0.64
CHMP1A-204ENST00000547687 MANSC4A6NHS7 340 aaPredicted RBP19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 UNCXA6NJT0 531 aa19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 HLA-DOAP06340 250 aa19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 PPP2R5BQ15173 497 aa19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 NBPF11Q86T75 865 aa19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 IFNL1Q8IU54 200 aa19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 NEDD1Q8NHV4 660 aa19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 FAM200AQ8TCP9 573 aa19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 MRPS27Q92552 414 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-204ENST00000547687 ATAD5Q96QE3 1844 aa19.02■□□□□ 0.63
CHMP1A-204ENST00000547687 KINO60870 393 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 DDAH1O94760 285 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 CALM1P0DP23 149 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 CALM2P0DP24 149 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 CALM3P0DP25 149 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 U2AF2P26368 475 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 ANKS1AQ92625 1134 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 KAT14Q9H8E8 782 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 IRF6O14896 467 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 NPM3O75607 178 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 ADCY5O95622 1261 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 GUCY1A2P33402 732 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 ANO6Q4KMQ2 910 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 CCDC178Q5BJE1 867 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 MS4A4AQ96JQ5 239 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 DHX36Q9H2U1 1008 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 STX8Q9UNK0 236 aa19.01■□□□□ 0.63
CHMP1A-204ENST00000547687 SPDYE5A6NIY4 337 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 DEXIO95424 95 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 BRI3BPQ8WY22 251 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 DOCK1Q14185 1865 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 PHF20L1A8MW92 1017 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 SLC39A14Q15043 492 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 PNMA1Q8ND90 353 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 SWAP70Q9UH65 585 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 ZNF112Q9UJU3 913 aa19■□□□□ 0.63
CHMP1A-204ENST00000547687 NOL7Q9UMY1 257 aaKnown RBP19■□□□□ 0.63
CHMP1A-204ENST00000547687 BRCA2P51587 3418 aa18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 MYH6P13533 1939 aa18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 CCL15-CCL14A0A0B4J2E2 113 aa18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 PTMAP06454 111 aaKnown RBP18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 MSNP26038 577 aaKnown RBP18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 SHMT1P34896 483 aa18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 SAFBQ15424 915 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 CCL15Q16663 113 aa18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 CCDC84Q86UT8 332 aaPredicted RBP18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 ERO1BQ86YB8 467 aa18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 FMR1NBQ8N0W7 255 aaPredicted RBP18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 EHD4Q9H223 541 aa18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 RBM28Q9NW13 759 aaKnown RBP18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 PHIPQ8WWQ0 1821 aa18.99■□□□□ 0.63
CHMP1A-204ENST00000547687 A0A1B0GVL5 298 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 PLEKHA8P1O95397 391 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 AKR1B1P15121 316 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 CTCFLQ8NI51 663 aaPredicted RBP18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 ZNF296Q8WUU4 475 aaPredicted RBP18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 CEP95Q96GE4 821 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 TMEM47Q9BQJ4 181 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 DNAJC18Q9H819 358 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 PI4KBQ9UBF8 816 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 MMP1P03956 469 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms