RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SLITRK4Q8IW52 837 aa6.51□□□□□ -1.37
SCAF11-210ENST00000547654 G6PC3Q9BUM1 346 aa6.51□□□□□ -1.37
SCAF11-210ENST00000547654 BRMS1Q9HCU9 246 aa6.51□□□□□ -1.37
SCAF11-210ENST00000547654 KIAA1522Q9P206 1035 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-210ENST00000547654 CDK11AQ9UQ88 783 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-210ENST00000547654 ZNF281Q9Y2X9 895 aa6.51□□□□□ -1.37
SCAF11-210ENST00000547654 UBOX5O94941 541 aa6.5□□□□□ -1.37
SCAF11-210ENST00000547654 GBP1P32455 592 aa6.5□□□□□ -1.37
SCAF11-210ENST00000547654 KIR2DL1P43626 348 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-210ENST00000547654 KIR2DL2P43627 348 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-210ENST00000547654 RACK1P63244 317 aaKnown RBP6.5□□□□□ -1.37
SCAF11-210ENST00000547654 ENOX1Q8TC92 643 aaKnown RBP6.5□□□□□ -1.37
SCAF11-210ENST00000547654 SYTL5Q8TDW5 730 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-210ENST00000547654 MAP6Q96JE9 813 aa6.5□□□□□ -1.37
SCAF11-210ENST00000547654 KIF2CQ99661 725 aa6.5□□□□□ -1.37
SCAF11-210ENST00000547654 NT5C1AQ9BXI3 368 aa6.5□□□□□ -1.37
SCAF11-210ENST00000547654 FOXP3Q9BZS1 431 aa6.5□□□□□ -1.37
SCAF11-210ENST00000547654 CRTAC1Q9NQ79 661 aa6.5□□□□□ -1.37
SCAF11-210ENST00000547654 UBP1Q9NZI7 540 aa6.5□□□□□ -1.37
SCAF11-210ENST00000547654 NRDCO43847 1150 aa6.49□□□□□ -1.37
SCAF11-210ENST00000547654 EPHB3P54753 998 aa6.49□□□□□ -1.37
SCAF11-210ENST00000547654 PCBP3P57721 371 aaKnown RBP6.49□□□□□ -1.37
SCAF11-210ENST00000547654 CLCQ05315 142 aa6.49□□□□□ -1.37
SCAF11-210ENST00000547654 SNAP47Q5SQN1 464 aa6.49□□□□□ -1.37
SCAF11-210ENST00000547654 CDCP2Q5VXM1 449 aa6.49□□□□□ -1.37
SCAF11-210ENST00000547654 HDAC8Q9BY41 377 aa6.49□□□□□ -1.37
SCAF11-210ENST00000547654 METTL5Q9NRN9 209 aaKnown RBP6.49□□□□□ -1.37
SCAF11-210ENST00000547654 GGT7Q9UJ14 662 aa6.49□□□□□ -1.37
SCAF11-210ENST00000547654 SUPT16HQ9Y5B9 1047 aaKnown RBP6.49□□□□□ -1.37
SCAF11-210ENST00000547654 MEIS3P2A8K0S8 358 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 NOTOA8MTQ0 251 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 TLR3O15455 904 aaKnown RBP6.48□□□□□ -1.37
SCAF11-210ENST00000547654 FKTNO75072 461 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 MLECQ14165 292 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 SP8Q8IXZ3 490 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 REXO1Q8N1G1 1221 aaKnown RBP6.48□□□□□ -1.37
SCAF11-210ENST00000547654 PANK1Q8TE04 598 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 PUS7Q96PZ0 661 aaKnown RBP6.48□□□□□ -1.37
SCAF11-210ENST00000547654 BCL11AQ9H165 835 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 IGSF5Q9NSI5 407 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 TCFL5Q9UL49 500 aa6.48□□□□□ -1.37
SCAF11-210ENST00000547654 RGS13O14921 159 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 N4BP3O15049 544 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 EFEMP2O95967 443 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 VIPR1P32241 457 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 DBX2Q6ZNG2 339 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 DAGLBQ8NCG7 672 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 CXorf38Q8TB03 319 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 DACT3Q96B18 629 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-210ENST00000547654 XYLT2Q9H1B5 865 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 ANTXR1Q9H6X2 564 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 CNNM2Q9H8M5 875 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 CNTD2Q9H8S5 307 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 DDX41Q9UJV9 622 aaKnown RBP6.47□□□□□ -1.37
SCAF11-210ENST00000547654 PCDHB14Q9Y5E9 798 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 TAF6LQ9Y6J9 622 aa6.47□□□□□ -1.37
SCAF11-210ENST00000547654 ABLIM1O14639 778 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 RAG1P15918 1043 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 TCF3P15923 654 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 PNLIPP16233 465 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 SDHBP21912 280 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 ITGAEP38570 1179 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 ZNF394Q53GI3 561 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 USHBP1Q8N6Y0 703 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 ZNF655Q8N720 491 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-210ENST00000547654 TMEM87AQ8NBN3 555 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 TCTN2Q96GX1 697 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 HHIPL1Q96JK4 782 aa6.46□□□□□ -1.38
SCAF11-210ENST00000547654 OTOL1A6NHN0 477 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-210ENST00000547654 SYPP08247 313 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 CELA3BP08861 270 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 ARL4AP40617 200 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 RTP1P59025 263 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 CWF19L2Q2TBE0 894 aaKnown RBP6.45□□□□□ -1.38
SCAF11-210ENST00000547654 OVOS1Q6IE37 1185 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 CNKSR3Q6P9H4 555 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 PRRT2Q7Z6L0 340 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-210ENST00000547654 FEZF2Q8TBJ5 459 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 ATG4CQ96DT6 458 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 GMIPQ9P107 970 aa6.45□□□□□ -1.38
SCAF11-210ENST00000547654 TMEM82A0PJX8 343 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 TNFRSF10CO14798 259 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 ACRP10323 421 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 ZNF76P36508 570 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 CDR1P51861 262 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 KRTAP1-1Q07627 177 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 ARSHQ5FYA8 562 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 TMC3Q7Z5M5 1100 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 LINC00116Q8NCU8 138 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 MZB1Q8WU39 189 aa6.44□□□□□ -1.38
SCAF11-210ENST00000547654 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCAF11-210ENST00000547654 IRS4O14654 1257 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-210ENST00000547654 MPOP05164 745 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 POLR2BP30876 1174 aaKnown RBP6.43□□□□□ -1.38
SCAF11-210ENST00000547654 CEBPAP49715 358 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-210ENST00000547654 ERVFRD-1P60508 538 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 YBX1P67809 324 aaKnown RBP6.43□□□□□ -1.38
SCAF11-210ENST00000547654 TMEM62Q0P6H9 643 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 VMACQ2NL98 169 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms