RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 KIFC2Q96AC6 838 aa27.02■■□□□ 1.92
SMARCD1-203ENST00000547247 ATG4CQ96DT6 458 aa27.02■■□□□ 1.92
SMARCD1-203ENST00000547247 R3HDMLQ9H3Y0 253 aa27.02■■□□□ 1.92
SMARCD1-203ENST00000547247 MAD2L2Q9UI95 211 aa27.02■■□□□ 1.92
SMARCD1-203ENST00000547247 PALM3A6NDB9 673 aaPredicted RBP27.01■■□□□ 1.92
SMARCD1-203ENST00000547247 RXRAP19793 462 aa27.01■■□□□ 1.92
SMARCD1-203ENST00000547247 KIF5BP33176 963 aa27.01■■□□□ 1.92
SMARCD1-203ENST00000547247 RCAN1P53805 252 aa27.01■■□□□ 1.92
SMARCD1-203ENST00000547247 EVCP57679 992 aa27.01■■□□□ 1.92
SMARCD1-203ENST00000547247 STAG2Q8N3U4 1231 aa27.01■■□□□ 1.92
SMARCD1-203ENST00000547247 RLFQ13129 1914 aa27.01■■□□□ 1.91
SMARCD1-203ENST00000547247 SLC16A2P36021 539 aa27.01■■□□□ 1.91
SMARCD1-203ENST00000547247 AK2P54819 239 aa27.01■■□□□ 1.91
SMARCD1-203ENST00000547247 C17orf99Q6UX52 265 aa27.01■■□□□ 1.91
SMARCD1-203ENST00000547247 RAB11FIP4Q86YS3 637 aa27.01■■□□□ 1.91
SMARCD1-203ENST00000547247 FANCBQ8NB91 859 aa27.01■■□□□ 1.91
SMARCD1-203ENST00000547247 CPA4Q9UI42 421 aa27.01■■□□□ 1.91
SMARCD1-203ENST00000547247 ADAMTS5Q9UNA0 930 aa27.01■■□□□ 1.91
SMARCD1-203ENST00000547247 PARP14Q460N5 1801 aa27■■□□□ 1.91
SMARCD1-203ENST00000547247 KLRF2D3W0D1 207 aa27■■□□□ 1.91
SMARCD1-203ENST00000547247 SYDE2Q5VT97 1194 aa27■■□□□ 1.91
SMARCD1-203ENST00000547247 CCDC144CPQ8IYA2 1237 aa27■■□□□ 1.91
SMARCD1-203ENST00000547247 MB21D1Q8N884 522 aa27■■□□□ 1.91
SMARCD1-203ENST00000547247 GOLGA8BA8MQT2 603 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 VWA5AO00534 786 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 FDX1P10109 184 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 ANKRD13CQ8N6S4 541 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 IL27Q8NEV9 243 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 LARP6Q9BRS8 491 aaKnown RBP26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 PAGR1Q9BTK6 254 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 UBA5Q9GZZ9 404 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 RBPJLQ9UBG7 517 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 PRR12Q9ULL5 1215 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 RABGAP1Q9Y3P9 1069 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 CASP8AP2Q9UKL3 1982 aa26.99■■□□□ 1.91
SMARCD1-203ENST00000547247 BCRP11274 1271 aa26.98■■□□□ 1.91
SMARCD1-203ENST00000547247 POTEEQ6S8J3 1075 aa26.98■■□□□ 1.91
SMARCD1-203ENST00000547247 ZNF274Q96GC6 653 aaPredicted RBP26.98■■□□□ 1.91
SMARCD1-203ENST00000547247 CTDP1Q9Y5B0 961 aaPredicted RBP26.98■■□□□ 1.91
SMARCD1-203ENST00000547247 GOLGA8AA7E2F4 631 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 ZBED4O75132 1171 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 PDIA3P30101 505 aaKnown RBP26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 GNAQP50148 359 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 FAM110CQ1W6H9 321 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 CPVLQ9H3G5 476 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 PRDM10Q9NQV6 1147 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 MORF4L1Q9UBU8 362 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 METAP2P50579 478 aaKnown RBP eCLIP26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 PPP2R5BQ15173 497 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 RTN1Q16799 776 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 TXNRD2Q9NNW7 524 aa26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 RBM28Q9NW13 759 aaKnown RBP26.97■■□□□ 1.91
SMARCD1-203ENST00000547247 GPR25O00155 361 aa26.96■■□□□ 1.91
SMARCD1-203ENST00000547247 NOM1Q5C9Z4 860 aaKnown RBP26.96■■□□□ 1.91
SMARCD1-203ENST00000547247 LZTS2Q9BRK4 669 aa26.96■■□□□ 1.91
SMARCD1-203ENST00000547247 SLC38A10Q9HBR0 1119 aa26.96■■□□□ 1.91
SMARCD1-203ENST00000547247 BTBD7Q9P203 1132 aa26.96■■□□□ 1.91
SMARCD1-203ENST00000547247 HPS5Q9UPZ3 1129 aa26.96■■□□□ 1.91
SMARCD1-203ENST00000547247 DHX16O60231 1041 aaKnown RBP26.95■■□□□ 1.9
SMARCD1-203ENST00000547247 ST18O60284 1047 aa26.95■■□□□ 1.9
SMARCD1-203ENST00000547247 CNMDO75829 334 aa26.95■■□□□ 1.9
SMARCD1-203ENST00000547247 ERVK-9P63128 1117 aa26.95■■□□□ 1.9
SMARCD1-203ENST00000547247 ERVK-24P63145 666 aa26.95■■□□□ 1.9
SMARCD1-203ENST00000547247 ADGRF4Q8IZF3 695 aa26.95■■□□□ 1.9
SMARCD1-203ENST00000547247 GPRC5AQ8NFJ5 357 aa26.95■■□□□ 1.9
SMARCD1-203ENST00000547247 CCDC196A0A1B0GTZ2 297 aa26.94■■□□□ 1.9
SMARCD1-203ENST00000547247 PEX10O60683 326 aa26.94■■□□□ 1.9
SMARCD1-203ENST00000547247 NOL8Q76FK4 1167 aaKnown RBP26.94■■□□□ 1.9
SMARCD1-203ENST00000547247 REPS2Q8NFH8 660 aa26.94■■□□□ 1.9
SMARCD1-203ENST00000547247 TPCN1Q9ULQ1 816 aa26.94■■□□□ 1.9
SMARCD1-203ENST00000547247 A0A0G2JMZ2 1700 aa26.94■■□□□ 1.9
SMARCD1-203ENST00000547247 NID2Q14112 1375 aa26.93■■□□□ 1.9
SMARCD1-203ENST00000547247 SMARCA1P28370 1054 aa26.93■■□□□ 1.9
SMARCD1-203ENST00000547247 SP3Q02447 781 aa26.93■■□□□ 1.9
SMARCD1-203ENST00000547247 TMEM132BQ14DG7 1078 aa26.93■■□□□ 1.9
SMARCD1-203ENST00000547247 RANBP17Q9H2T7 1088 aaKnown RBP26.93■■□□□ 1.9
SMARCD1-203ENST00000547247 VAT1LQ9HCJ6 419 aa26.93■■□□□ 1.9
SMARCD1-203ENST00000547247 PLEKHA8P1O95397 391 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 CDC27P30260 824 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 PLS1Q14651 629 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 Q3C1V9 767 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 TMTC3Q6ZXV5 915 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 NBPF11Q86T75 865 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 CPXCR1Q8N123 301 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 SPATC1LQ9H0A9 340 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 RIOX1Q9H6W3 641 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 JMJD4Q9H9V9 463 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 FAM217BQ9NTX9 383 aaPredicted RBP26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 ZNF214Q9UL59 606 aaPredicted RBP26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 ATP2A1O14983 1001 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 SNAP25P60880 206 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 CCT2P78371 535 aaKnown RBP26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 CCNA1P78396 465 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 STK3Q13188 491 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 SPZ1Q9BXG8 430 aa26.92■■□□□ 1.9
SMARCD1-203ENST00000547247 COL11A1P12107 1806 aaPredicted RBP26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 FKTNO75072 461 aa26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 ADD1P35611 737 aaKnown RBP26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 STAT3P40763 770 aa26.91■■□□□ 1.9
SMARCD1-203ENST00000547247 OAZ1P54368 228 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms