RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 SSC5DA1L4H1 1573 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 UBE2Q2LH0YL09 131 aa18.85■□□□□ 0.61
BRF1-208ENST00000546997 PLEKHA8P1O95397 391 aa18.85■□□□□ 0.61
BRF1-208ENST00000546997 CALM1P0DP23 149 aa18.85■□□□□ 0.61
BRF1-208ENST00000546997 CALM2P0DP24 149 aa18.85■□□□□ 0.61
BRF1-208ENST00000546997 CALM3P0DP25 149 aa18.85■□□□□ 0.61
BRF1-208ENST00000546997 CCDC82Q8N4S0 544 aa18.85■□□□□ 0.61
BRF1-208ENST00000546997 CBX8Q9HC52 389 aa18.85■□□□□ 0.61
BRF1-208ENST00000546997 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.85■□□□□ 0.61
BRF1-208ENST00000546997 ORC3Q9UBD5 711 aaPredicted RBP18.85■□□□□ 0.61
BRF1-208ENST00000546997 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
BRF1-208ENST00000546997 PHF20L1A8MW92 1017 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 ATP2B2Q01814 1243 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 SIAH1Q8IUQ4 282 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 TNMDQ9H2S6 317 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 KANSL2Q9H9L4 492 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 EEF2P13639 858 aaKnown RBP18.84■□□□□ 0.61
BRF1-208ENST00000546997 SLC20A2Q08357 652 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
BRF1-208ENST00000546997 CTCFLQ8NI51 663 aaPredicted RBP18.84■□□□□ 0.61
BRF1-208ENST00000546997 CLSTN2Q9H4D0 955 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 TAF1DQ9H5J8 278 aaPredicted RBP18.84■□□□□ 0.61
BRF1-208ENST00000546997 ZBTB21Q9ULJ3 1066 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 FZD1Q9UP38 647 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 DOCK1Q14185 1865 aa18.84■□□□□ 0.61
BRF1-208ENST00000546997 CCDC196A0A1B0GTZ2 297 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 ADM5C9JUS6 153 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 IFNAR1P17181 557 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 ICA1Q05084 483 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 FUT2Q10981 343 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 CEP135Q66GS9 1140 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 ATL3Q6DD88 541 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 NBPF11Q86T75 865 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 STAG2Q8N3U4 1231 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 PGBD1Q96JS3 809 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 C16orf45Q96MC5 204 aaPredicted RBP18.83■□□□□ 0.61
BRF1-208ENST00000546997 TRIM5Q9C035 493 aa18.83■□□□□ 0.61
BRF1-208ENST00000546997 GOLGA6L4A6NEF3 574 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 CDKL5O76039 1030 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 LIG1P18858 919 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 CAP2P40123 477 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 GRM4Q14833 912 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 TPD52L1Q16890 204 aaPredicted RBP18.82■□□□□ 0.6
BRF1-208ENST00000546997 CPLX2Q6PUV4 134 aaKnown RBP18.82■□□□□ 0.6
BRF1-208ENST00000546997 TMTC3Q6ZXV5 915 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 DRC7Q8IY82 874 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 FBXO18Q8NFZ0 1043 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 DCPSQ96C86 337 aaKnown RBP18.82■□□□□ 0.6
BRF1-208ENST00000546997 ERO1AQ96HE7 468 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 MRFAP1L1Q96HT8 127 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 C8orf76Q96K31 380 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 RBM28Q9NW13 759 aaKnown RBP18.82■□□□□ 0.6
BRF1-208ENST00000546997 MAD2L2Q9UI95 211 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 IQCA1LA6NCM1 817 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 TUBB4AP04350 444 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 PPP2R5BQ15173 497 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 RGS22Q8NE09 1264 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 AIFM3Q96NN9 605 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 SLC26A6Q9BXS9 759 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 CABP5Q9NP86 173 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 RCOR1Q9UKL0 485 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 PPP2R3BQ9Y5P8 575 aa18.82■□□□□ 0.6
BRF1-208ENST00000546997 USP17L5A8MUK1 530 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 GOLGA8HP0CJ92 632 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 ANO6Q4KMQ2 910 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 EAPPQ56P03 285 aaPredicted RBP18.81■□□□□ 0.6
BRF1-208ENST00000546997 OTUD7BQ6GQQ9 843 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 NYAP1Q6ZVC0 841 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 LUZP1Q86V48 1076 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 SRBD1Q8N5C6 995 aaKnown RBP18.81■□□□□ 0.6
BRF1-208ENST00000546997 ZNF396Q96N95 335 aaPredicted RBP18.81■□□□□ 0.6
BRF1-208ENST00000546997 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 NYAP2Q9P242 653 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 OTOFQ9HC10 1997 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 FMNL1O95466 1100 aaPredicted RBP18.81■□□□□ 0.6
BRF1-208ENST00000546997 PDHBP11177 359 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 KIF5BP33176 963 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 DHX8Q14562 1220 aaKnown RBP18.81■□□□□ 0.6
BRF1-208ENST00000546997 USP17L2Q6R6M4 530 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 KRT26Q7Z3Y9 468 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 SULF1Q8IWU6 871 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 GJB4Q9NTQ9 266 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 TMEM51Q9NW97 253 aa18.81■□□□□ 0.6
BRF1-208ENST00000546997 CNTNAP5Q8WYK1 1306 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 PAPPA2Q9BXP8 1791 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 A0A1W2PRG0 241 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 SLC35G1Q2M3R5 365 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 CCDC84Q86UT8 332 aaPredicted RBP18.8■□□□□ 0.6
BRF1-208ENST00000546997 SPOCK2Q92563 424 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 MKL1Q969V6 931 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 USP28Q96RU2 1077 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 CALCOCO1Q9P1Z2 691 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 STK36Q9NRP7 1315 aa18.8■□□□□ 0.6
BRF1-208ENST00000546997 hCG_1642624A0A1W2PR95 340 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 PALM3A6NDB9 673 aaPredicted RBP18.79■□□□□ 0.6
BRF1-208ENST00000546997 POTEIP0CG38 1075 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 POTEJP0CG39 1038 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 INPP5BP32019 993 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 ECE1P42892 770 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms