RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
SSH1-205ENST00000546812 OTOP2Q7RTS6 562 aa11.22□□□□□ -0.61
SSH1-205ENST00000546812 SH2D4AQ9H788 454 aa11.22□□□□□ -0.61
SSH1-205ENST00000546812 VCPKMTQ9H867 229 aa11.22□□□□□ -0.61
SSH1-205ENST00000546812 PCDHA11Q9Y5I1 949 aa11.22□□□□□ -0.61
SSH1-205ENST00000546812 VWA5AO00534 786 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
SSH1-205ENST00000546812 GNAI2P04899 355 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 CT47B1P0C2W7 299 aaPredicted RBP11.21□□□□□ -0.61
SSH1-205ENST00000546812 RABGGTBP53611 331 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
SSH1-205ENST00000546812 GNASQ5JWF2 1037 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 MAMDC4Q6UXC1 1216 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 ALYREFQ86V81 257 aaKnown RBP11.21□□□□□ -0.61
SSH1-205ENST00000546812 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.61
SSH1-205ENST00000546812 UPF3AQ9H1J1 476 aaKnown RBP11.21□□□□□ -0.61
SSH1-205ENST00000546812 SPC25Q9HBM1 224 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 C11orf16Q9NQ32 467 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 ZHX1Q9UKY1 873 aaPredicted RBP11.21□□□□□ -0.61
SSH1-205ENST00000546812 COG5Q9UP83 839 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 MTCH2Q9Y6C9 303 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 SLC4A7Q9Y6M7 1214 aa11.21□□□□□ -0.61
SSH1-205ENST00000546812 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
SSH1-205ENST00000546812 MYOGP15173 224 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 GJA9P57773 515 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 EVX2Q03828 476 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 ICA1Q05084 483 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 ACVR2BQ13705 512 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 HIPK3Q9H422 1215 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 FBXO28Q9NVF7 368 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 MCM9Q9NXL9 1143 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 DBNLQ9UJU6 430 aaKnown RBP11.2□□□□□ -0.62
SSH1-205ENST00000546812 ZNF214Q9UL59 606 aaPredicted RBP11.2□□□□□ -0.62
SSH1-205ENST00000546812 PPP1R9AQ9ULJ8 1098 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 PLXNA1Q9UIW2 1896 aa11.2□□□□□ -0.62
SSH1-205ENST00000546812 TCF20Q9UGU0 1960 aaKnown RBP11.19□□□□□ -0.62
SSH1-205ENST00000546812 FOCADQ5VW36 1801 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 A0A0G2JMZ2 1700 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 DNAJC25-GNG10A0A024R161 153 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 RFXAPO00287 272 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 ADCY6O43306 1168 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 NKX3-2P78367 333 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 OS9Q13438 667 aaPredicted RBP11.19□□□□□ -0.62
SSH1-205ENST00000546812 CCDC144BQ3MJ40 725 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
SSH1-205ENST00000546812 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 RPUSD2Q8IZ73 545 aaKnown RBP11.19□□□□□ -0.62
SSH1-205ENST00000546812 SLC43A3Q8NBI5 491 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 REPS2Q8NFH8 660 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.62
SSH1-205ENST00000546812 DDX11Q96FC9 970 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 SWAP70Q9UH65 585 aa11.19□□□□□ -0.62
SSH1-205ENST00000546812 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
SSH1-205ENST00000546812 UMODL1Q5DID0 1318 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 MAGEB6P1A0A0J9YX57 407 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 FAM86C2PA6NEL3 165 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 PI4K2BG5E9Z4 385 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 CTAGE5O15320 804 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 AKR1B1P15121 316 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 ATP2A2P16615 1042 aaKnown RBP11.18□□□□□ -0.62
SSH1-205ENST00000546812 CCL23P55773 120 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 POLA2Q14181 598 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 HLA-CQ95604 372 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 CRNKL1Q9BZJ0 848 aaKnown RBP11.18□□□□□ -0.62
SSH1-205ENST00000546812 ABHD16BQ9H3Z7 469 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 ANTXR1Q9H6X2 564 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
SSH1-205ENST00000546812 TLR7Q9NYK1 1049 aaKnown RBP11.18□□□□□ -0.62
SSH1-205ENST00000546812 CDK5RAP2Q96SN8 1893 aa11.18□□□□□ -0.62
SSH1-205ENST00000546812 SMIM22K7EJ46 135 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 SURF6O75683 361 aaKnown RBP11.17□□□□□ -0.62
SSH1-205ENST00000546812 CABYRO75952 493 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 CYP2D6P10635 497 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 TMEM67Q5HYA8 995 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 VWCEQ96DN2 955 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 DYNLL2Q96FJ2 89 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 NOC4LQ9BVI4 516 aaKnown RBP11.17□□□□□ -0.62
SSH1-205ENST00000546812 TEX13BQ9BXU2 312 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 SEZ6LQ9BYH1 1024 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 CCDC8Q9H0W5 538 aaPredicted RBP11.17□□□□□ -0.62
SSH1-205ENST00000546812 WNT8AQ9H1J5 351 aa11.17□□□□□ -0.62
SSH1-205ENST00000546812 DCP1AQ9NPI6 582 aaPredicted RBP11.17□□□□□ -0.62
SSH1-205ENST00000546812 MYH1P12882 1939 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 EPOPA6NHQ4 379 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 ZBBXA8MT70 800 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 CA3P07451 260 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 EEF2P13639 858 aaKnown RBP11.16□□□□□ -0.62
SSH1-205ENST00000546812 RARSP54136 660 aaKnown RBP11.16□□□□□ -0.62
SSH1-205ENST00000546812 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 FAM83BQ5T0W9 1011 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 KRT40Q6A162 431 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
SSH1-205ENST00000546812 CXCL17Q6UXB2 119 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 SSH3Q8TE77 659 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 EAF2Q96CJ1 260 aaPredicted RBP11.16□□□□□ -0.62
SSH1-205ENST00000546812 TRPV6Q9H1D0 765 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 KANSL2Q9H9L4 492 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms