RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 FDX1P10109 184 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 PSMA5P28066 241 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 SLC16A2P36021 539 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 STAT3P40763 770 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 SLC4A3P48751 1232 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 PRMT2P55345 433 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 GPATCH4Q5T3I0 446 aaKnown RBP19.67■□□□□ 0.74
LTBR-215ENST00000546296 FBXO46Q6PJ61 603 aaPredicted RBP19.67■□□□□ 0.74
LTBR-215ENST00000546296 TMTC2Q8N394 836 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 MOV10L1Q9BXT6 1211 aaKnown RBP19.67■□□□□ 0.74
LTBR-215ENST00000546296 LRRC2Q9BYS8 371 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 PORCNQ9H237 461 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 SENP2Q9HC62 589 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 GPHNQ9NQX3 736 aaPredicted RBP19.67■□□□□ 0.74
LTBR-215ENST00000546296 SRRDQ9UH36 339 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 PRR12Q9ULL5 1215 aa19.67■□□□□ 0.74
LTBR-215ENST00000546296 CCDC69A6NI79 296 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 SH2B2O14492 632 aaPredicted RBP19.66■□□□□ 0.74
LTBR-215ENST00000546296 FGD1P98174 961 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 COL9A3Q14050 684 aaPredicted RBP19.66■□□□□ 0.74
LTBR-215ENST00000546296 ASPRV1Q53RT3 343 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 SYDE2Q5VT97 1194 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 PLEKHH3Q7Z736 793 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 NCAPG2Q86XI2 1143 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 CPXCR1Q8N123 301 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 RAET1EQ8TD07 263 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 LY9Q9HBG7 655 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 SLC38A10Q9HBR0 1119 aa19.66■□□□□ 0.74
LTBR-215ENST00000546296 SLC25A27O95847 323 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 SNAP25P60880 206 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 EXOSC10Q01780 885 aaKnown RBP19.65■□□□□ 0.74
LTBR-215ENST00000546296 PRKCZQ05513 592 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 BLOC1S2Q6QNY1 142 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 BTNL9Q6UXG8 535 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 GPR142Q7Z601 462 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 REPS2Q8NFH8 660 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 TCEANC2Q96MN5 208 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 TEX13BQ9BXU2 312 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 UBA5Q9GZZ9 404 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 MROH8Q9H579 483 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 RAVER2Q9HCJ3 691 aaKnown RBP19.65■□□□□ 0.74
LTBR-215ENST00000546296 GABRQQ9UN88 632 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 IVNS1ABPQ9Y6Y0 642 aa19.65■□□□□ 0.74
LTBR-215ENST00000546296 CPA1P15085 419 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 ERCC3P19447 782 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 LIFRP42702 1097 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 FLT3LGP49771 235 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 SNRNP48Q6IEG0 339 aaKnown RBP19.64■□□□□ 0.73
LTBR-215ENST00000546296 CCDC174Q6PII3 467 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 SHCBP1Q8NEM2 672 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 NUP133Q8WUM0 1156 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 ZNF214Q9UL59 606 aaPredicted RBP19.64■□□□□ 0.73
LTBR-215ENST00000546296 PTCH2Q9Y6C5 1203 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 WDR19Q8NEZ3 1342 aa19.64■□□□□ 0.73
LTBR-215ENST00000546296 DHX16O60231 1041 aaKnown RBP19.63■□□□□ 0.73
LTBR-215ENST00000546296 SEC24BO95487 1268 aa19.63■□□□□ 0.73
LTBR-215ENST00000546296 CASTP20810 708 aaKnown RBP19.63■□□□□ 0.73
LTBR-215ENST00000546296 COPB2P35606 906 aa19.63■□□□□ 0.73
LTBR-215ENST00000546296 OAZ1P54368 228 aa19.63■□□□□ 0.73
LTBR-215ENST00000546296 SYNE3Q6ZMZ3 975 aa19.63■□□□□ 0.73
LTBR-215ENST00000546296 RIOX2Q8IUF8 465 aa19.63■□□□□ 0.73
LTBR-215ENST00000546296 ZNF654Q8IZM8 581 aa19.63■□□□□ 0.73
LTBR-215ENST00000546296 NUDT12Q9BQG2 462 aa19.63■□□□□ 0.73
LTBR-215ENST00000546296 SLC12A7Q9Y666 1083 aa19.63■□□□□ 0.73
LTBR-215ENST00000546296 GRM4Q14833 912 aa19.62■□□□□ 0.73
LTBR-215ENST00000546296 C8orf34Q49A92 452 aa19.62■□□□□ 0.73
LTBR-215ENST00000546296 SOCS4Q8WXH5 440 aa19.62■□□□□ 0.73
LTBR-215ENST00000546296 CPVLQ9H3G5 476 aa19.62■□□□□ 0.73
LTBR-215ENST00000546296 VAT1LQ9HCJ6 419 aa19.62■□□□□ 0.73
LTBR-215ENST00000546296 SLC15A5A6NIM6 579 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 KLRF2D3W0D1 207 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 ATP2A1O14983 1001 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 STRNO43815 780 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 DDAH1O94760 285 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 RPS6KB1P23443 525 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 PTPREP23469 700 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 TROAPQ12815 778 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 STAG2Q8N3U4 1231 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 CTCFLQ8NI51 663 aaPredicted RBP19.61■□□□□ 0.73
LTBR-215ENST00000546296 AGBL1Q96MI9 1066 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 MYL10Q9BUA6 226 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 MAD2L2Q9UI95 211 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 GJD2Q9UKL4 321 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 HPS5Q9UPZ3 1129 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 CYP46A1Q9Y6A2 500 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 RLFQ13129 1914 aa19.61■□□□□ 0.73
LTBR-215ENST00000546296 PALM3A6NDB9 673 aaPredicted RBP19.6■□□□□ 0.73
LTBR-215ENST00000546296 CALM1P0DP23 149 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 CALM2P0DP24 149 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 CALM3P0DP25 149 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 FCER1AP12319 257 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 CYP2B6P20813 491 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 KIF5BP33176 963 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 SLC9C1Q4G0N8 1177 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 Q6ZUG5 572 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 ADGRF4Q8IZF3 695 aa19.6■□□□□ 0.73
LTBR-215ENST00000546296 RANBP17Q9H2T7 1088 aaKnown RBP19.6■□□□□ 0.73
LTBR-215ENST00000546296 BIN2Q9UBW5 565 aaPredicted RBP19.6■□□□□ 0.73
LTBR-215ENST00000546296 NAP1L2Q9ULW6 460 aaPredicted RBP19.6■□□□□ 0.73
LTBR-215ENST00000546296 RIPK3Q9Y572 518 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms