RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.33■■□□□ 1.17
SKP2-208ENST00000546211 ZNF112Q9UJU3 913 aa22.33■■□□□ 1.17
SKP2-208ENST00000546211 ATAD5Q96QE3 1844 aa22.33■■□□□ 1.16
SKP2-208ENST00000546211 BAZ2BQ9UIF8 2168 aaKnown RBP22.33■■□□□ 1.16
SKP2-208ENST00000546211 EPHX2P34913 555 aa22.33■■□□□ 1.16
SKP2-208ENST00000546211 IKQ13123 557 aaPredicted RBP22.33■■□□□ 1.16
SKP2-208ENST00000546211 SF3A1Q15459 793 aaKnown RBP22.33■■□□□ 1.16
SKP2-208ENST00000546211 CAVIN1Q6NZI2 390 aaKnown RBP22.33■■□□□ 1.16
SKP2-208ENST00000546211 LINC00301Q8NCQ3 95 aa22.33■■□□□ 1.16
SKP2-208ENST00000546211 KCNG4Q8TDN1 519 aa22.33■■□□□ 1.16
SKP2-208ENST00000546211 NUP88Q99567 741 aaPredicted RBP22.33■■□□□ 1.16
SKP2-208ENST00000546211 VCPKMTQ9H867 229 aa22.33■■□□□ 1.16
SKP2-208ENST00000546211 USP17L10C9JJH3 530 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 TMEM232C9JQI7 657 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 ZBTB5O15062 677 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 TYW1BQ6NUM6 668 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 SPICE1Q8N0Z3 855 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 DAGLBQ8NCG7 672 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 MTMR8Q96EF0 704 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 WRNIP1Q96S55 665 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 FEZ1Q99689 392 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 C6orf50Q9HD87 102 aa22.32■■□□□ 1.16
SKP2-208ENST00000546211 NOL7Q9UMY1 257 aaKnown RBP22.32■■□□□ 1.16
SKP2-208ENST00000546211 IQCA1LA6NCM1 817 aa22.31■■□□□ 1.16
SKP2-208ENST00000546211 GNA11P29992 359 aa22.31■■□□□ 1.16
SKP2-208ENST00000546211 INPP5BP32019 993 aa22.31■■□□□ 1.16
SKP2-208ENST00000546211 SCYL3Q8IZE3 742 aa22.31■■□□□ 1.16
SKP2-208ENST00000546211 TNFRSF25Q93038 417 aa22.31■■□□□ 1.16
SKP2-208ENST00000546211 SYAP1Q96A49 352 aaPredicted RBP22.31■■□□□ 1.16
SKP2-208ENST00000546211 ZMYND12Q9H0C1 365 aa22.31■■□□□ 1.16
SKP2-208ENST00000546211 SOCS7O14512 581 aa22.3■■□□□ 1.16
SKP2-208ENST00000546211 SPTLC2O15270 562 aa22.3■■□□□ 1.16
SKP2-208ENST00000546211 ME1P48163 572 aa22.3■■□□□ 1.16
SKP2-208ENST00000546211 ZYXQ15942 572 aaKnown RBP22.3■■□□□ 1.16
SKP2-208ENST00000546211 PPP1R18Q6NYC8 613 aa22.3■■□□□ 1.16
SKP2-208ENST00000546211 BTNL9Q6UXG8 535 aa22.3■■□□□ 1.16
SKP2-208ENST00000546211 CCDC84Q86UT8 332 aaPredicted RBP22.3■■□□□ 1.16
SKP2-208ENST00000546211 ZC3H15Q8WU90 426 aaKnown RBP22.3■■□□□ 1.16
SKP2-208ENST00000546211 PICK1Q9NRD5 415 aa22.3■■□□□ 1.16
SKP2-208ENST00000546211 SMCO2A6NFE2 343 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 SLC39A14Q15043 492 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 SYDE2Q5VT97 1194 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 BICD2Q8TD16 824 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 PGBD1Q96JS3 809 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 GLIS2Q9BZE0 524 aaPredicted RBP22.29■■□□□ 1.16
SKP2-208ENST00000546211 SSC5DA1L4H1 1573 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 ESYT2A0FGR8 921 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 TOB1P50616 345 aaPredicted RBP22.29■■□□□ 1.16
SKP2-208ENST00000546211 STAT2P52630 851 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 FAM83BQ5T0W9 1011 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 KRT26Q7Z3Y9 468 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 JMYQ8N9B5 988 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 AS3MTQ9HBK9 375 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 CEP131Q9UPN4 1083 aa22.29■■□□□ 1.16
SKP2-208ENST00000546211 DOCK1Q14185 1865 aa22.28■■□□□ 1.16
SKP2-208ENST00000546211 UTRNP46939 3433 aa22.28■■□□□ 1.16
SKP2-208ENST00000546211 ADM5C9JUS6 153 aa22.28■■□□□ 1.16
SKP2-208ENST00000546211 CDC37Q16543 378 aaPredicted RBP22.28■■□□□ 1.16
SKP2-208ENST00000546211 KIAA1755Q5JYT7 1200 aa22.28■■□□□ 1.16
SKP2-208ENST00000546211 PIK3AP1Q6ZUJ8 805 aa22.28■■□□□ 1.16
SKP2-208ENST00000546211 COA7Q96BR5 231 aa22.28■■□□□ 1.16
SKP2-208ENST00000546211 KLRG1Q96E93 195 aa22.28■■□□□ 1.16
SKP2-208ENST00000546211 KIAA1683Q9H0B3 1180 aa22.28■■□□□ 1.16
SKP2-208ENST00000546211 CCDC194A0A1B0GVG4 234 aa22.27■■□□□ 1.16
SKP2-208ENST00000546211 GSE1Q14687 1217 aa22.27■■□□□ 1.16
SKP2-208ENST00000546211 QRICH1Q2TAL8 776 aa22.27■■□□□ 1.16
SKP2-208ENST00000546211 EARS2Q5JPH6 523 aaKnown RBP22.27■■□□□ 1.16
SKP2-208ENST00000546211 CHURC1Q8WUH1 139 aa22.27■■□□□ 1.16
SKP2-208ENST00000546211 ZKSCAN4Q969J2 545 aaPredicted RBP22.27■■□□□ 1.16
SKP2-208ENST00000546211 TAF1DQ9H5J8 278 aaPredicted RBP22.27■■□□□ 1.16
SKP2-208ENST00000546211 PCDHA7Q9UN72 937 aa22.27■■□□□ 1.16
SKP2-208ENST00000546211 PCDHA6Q9UN73 950 aa22.27■■□□□ 1.16
SKP2-208ENST00000546211 PCDHA8Q9Y5H6 950 aa22.27■■□□□ 1.16
SKP2-208ENST00000546211 SCN4AP35499 1836 aa22.27■■□□□ 1.15
SKP2-208ENST00000546211 FAM205CA6NFA0 338 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 TRIM75PA6NK02 468 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 PPP6R2O75170 966 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 ATP2B1P20020 1258 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 TRAPPC10P48553 1259 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 ADCY7P51828 1080 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 PTPAQ15257 358 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 FAM160B2Q86V87 743 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 LPAR1Q92633 364 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 TMEM63CQ9P1W3 806 aa22.26■■□□□ 1.15
SKP2-208ENST00000546211 M0R2N6 131 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 PLA2G6O60733 806 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 PPP1R11O60927 126 aaPredicted RBP22.25■■□□□ 1.15
SKP2-208ENST00000546211 PTPRAP18433 802 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 USP14P54578 494 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 EAPPQ56P03 285 aaPredicted RBP22.25■■□□□ 1.15
SKP2-208ENST00000546211 NOL9Q5SY16 702 aaKnown RBP22.25■■□□□ 1.15
SKP2-208ENST00000546211 ADALQ6DHV7 355 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 PNMA8AQ86V59 439 aaPredicted RBP22.25■■□□□ 1.15
SKP2-208ENST00000546211 WDR18Q9BV38 432 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 FEM1BQ9UK73 627 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 PRR12Q9ULL5 1215 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 FZD1Q9UP38 647 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 PCDHB6Q9Y5E3 794 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 ADAMTS3O15072 1205 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 WDR46O15213 610 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms