RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 NBPF11Q86T75 865 aa18.93■□□□□ 0.62
PPP1CA-211ENST00000546202 NSUN7Q8NE18 718 aaKnown RBP18.93■□□□□ 0.62
PPP1CA-211ENST00000546202 SMARCC2Q8TAQ2 1214 aa18.93■□□□□ 0.62
PPP1CA-211ENST00000546202 CCDC102AQ96A19 550 aa18.93■□□□□ 0.62
PPP1CA-211ENST00000546202 SPZ1Q9BXG8 430 aa18.93■□□□□ 0.62
PPP1CA-211ENST00000546202 RPAP3Q9H6T3 665 aaPredicted RBP18.93■□□□□ 0.62
PPP1CA-211ENST00000546202 BAZ2BQ9UIF8 2168 aaKnown RBP18.93■□□□□ 0.62
PPP1CA-211ENST00000546202 CNTNAP5Q8WYK1 1306 aa18.93■□□□□ 0.62
PPP1CA-211ENST00000546202 TMEM232C9JQI7 657 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 CYTH3O43739 400 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 CDKL5O76039 1030 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 CETPP11597 493 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 GADL1Q6ZQY3 521 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 FAM160B2Q86V87 743 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 CMTR1Q8N1G2 835 aaKnown RBP18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 MCOLN1Q9GZU1 580 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 RIOX1Q9H6W3 641 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 FEM1BQ9UK73 627 aa18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.92■□□□□ 0.62
PPP1CA-211ENST00000546202 TESPA1A2RU30 521 aaPredicted RBP18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L15C9J2P7 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L13C9JLJ4 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L11C9JVI0 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L18D6R9N7 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L22D6RA61 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L17D6RBQ6 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L19D6RCP7 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L20D6RJB6 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 HOXA7P31268 230 aaPredicted RBP18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 MAP2K2P36507 400 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 STAT2P52630 851 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 USP17L24Q0WX57 530 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 TREML2Q5T2D2 321 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 GPAT2Q6NUI2 795 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 CHURC1Q8WUH1 139 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 UBA5Q9GZZ9 404 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 CPVLQ9H3G5 476 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 ISY1Q9ULR0 285 aaKnown RBP18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 AGTPBP1Q9UPW5 1226 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 STK36Q9NRP7 1315 aa18.91■□□□□ 0.62
PPP1CA-211ENST00000546202 CCL15-CCL14A0A0B4J2E2 113 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 PTPDC1A2A3K4 754 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 JAK2O60674 1132 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 FMNL1O95466 1100 aaPredicted RBP18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 SLC16A2P36021 539 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 MKRN3Q13064 507 aaKnown RBP18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 CCL15Q16663 113 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 SYDE2Q5VT97 1194 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 CATSPERGQ6ZRH7 1159 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 CCDC82Q8N4S0 544 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 BRI3BPQ8WY22 251 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 PHKBQ93100 1093 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 MTMR8Q96EF0 704 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 RNF26Q9BY78 433 aaPredicted RBP18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 TANGO6Q9C0B7 1094 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 FBXO28Q9NVF7 368 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 A0A0G2JMZ2 1700 aa18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 COL11A1P12107 1806 aaPredicted RBP18.9■□□□□ 0.62
PPP1CA-211ENST00000546202 MANSC4A6NHS7 340 aaPredicted RBP18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 PRPF3O43395 683 aaKnown RBP18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 SLC4A3P48751 1232 aa18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 SSRP1Q08945 709 aaKnown RBP18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 ADGRF4Q8IZF3 695 aa18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 IPO9Q96P70 1041 aaKnown RBP18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 SLF1Q9BQI6 1058 aa18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 JMJD4Q9H9V9 463 aa18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 PRR12Q9ULL5 1215 aa18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 SLC45A1Q9Y2W3 748 aa18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 MYPNQ86TC9 1320 aa18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 THSD7BQ9C0I4 1608 aa18.89■□□□□ 0.61
PPP1CA-211ENST00000546202 DTNBO60941 627 aa18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 FLOT1O75955 427 aa18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 HSP90AA1P07900 732 aaKnown RBP18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 FDPSP14324 419 aaKnown RBP18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 HMGN5P82970 282 aaKnown RBP18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 IKQ13123 557 aaPredicted RBP18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 PABPC4Q13310 644 aaKnown RBP eCLIP18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 ANKRD23Q86SG2 305 aa18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 TRIM22Q8IYM9 498 aa18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 PRPF38AQ8NAV1 312 aaKnown RBP18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 SLC26A6Q9BXS9 759 aa18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 RBM27Q9P2N5 1060 aaKnown RBP18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 PPP1R9AQ9ULJ8 1098 aa18.88■□□□□ 0.61
PPP1CA-211ENST00000546202 PPFIA3O75145 1194 aa18.87■□□□□ 0.61
PPP1CA-211ENST00000546202 COG2Q14746 738 aa18.87■□□□□ 0.61
PPP1CA-211ENST00000546202 RRP36Q96EU6 259 aaKnown RBP18.87■□□□□ 0.61
PPP1CA-211ENST00000546202 ORC3Q9UBD5 711 aaPredicted RBP18.87■□□□□ 0.61
PPP1CA-211ENST00000546202 ADAMTS5Q9UNA0 930 aa18.87■□□□□ 0.61
PPP1CA-211ENST00000546202 SMC3Q9UQE7 1217 aa18.87■□□□□ 0.61
PPP1CA-211ENST00000546202 V9GY48 417 aaPredicted RBP18.87■□□□□ 0.61
PPP1CA-211ENST00000546202 BTBD19C9JJ37 291 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 GJB2P29033 226 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 DSG3P32926 999 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 INHBEP58166 350 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 PKN1Q16512 942 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 KIFC2Q96AC6 838 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 DDX11Q96FC9 970 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 PIGSQ96S52 555 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 PTPN18Q99952 460 aa18.86■□□□□ 0.61
PPP1CA-211ENST00000546202 RANBP17Q9H2T7 1088 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms