RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 WDR33Q9C0J8 1336 aaKnown RBP7.82□□□□□ -1.16
LDHC-209ENST00000545848 H7C1D1 291 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 EML1O00423 815 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 ITGB2P05107 769 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 HOXB4P17483 251 aaPredicted RBP7.82□□□□□ -1.16
LDHC-209ENST00000545848 ADH6P28332 368 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 HIBADHP31937 336 aaKnown RBP7.82□□□□□ -1.16
LDHC-209ENST00000545848 PRKG1Q13976 671 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 PUM3Q15397 648 aaKnown RBP7.82□□□□□ -1.16
LDHC-209ENST00000545848 ATP2B3Q16720 1220 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 ADGRA1Q86SQ6 560 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 ZFPM1Q8IX07 1006 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 SSH3Q8TE77 659 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 GLMNQ92990 594 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 CLMNQ96JQ2 1002 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 CAPNS2Q96L46 248 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 TEPSINQ96N21 525 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 TMX4Q9H1E5 349 aaPredicted RBP7.82□□□□□ -1.16
LDHC-209ENST00000545848 TDRD3Q9H7E2 651 aaKnown RBP7.82□□□□□ -1.16
LDHC-209ENST00000545848 AVENQ9NQS1 362 aaPredicted RBP7.82□□□□□ -1.16
LDHC-209ENST00000545848 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.82□□□□□ -1.16
LDHC-209ENST00000545848 EXOC6BQ9Y2D4 811 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 ATRNL1Q5VV63 1379 aa7.82□□□□□ -1.16
LDHC-209ENST00000545848 TNRC18O15417 2968 aaPredicted RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 A0A1B0GUL7 405 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 SERTM1A2A2V5 107 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 UBE2Q2LH0YL09 131 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 EFSO43281 561 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 CIAO1O76071 339 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 HSP90B1P14625 803 aaKnown RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 MCAMP43121 646 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 NFIAQ12857 509 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 SHROOM1Q2M3G4 852 aaPredicted RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 NBPF12Q5TAG4 269 aaPredicted RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 SH3PXD2AQ5TCZ1 1133 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 APOBEC3HQ6NTF7 200 aaKnown RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 LINC00114Q6XXX2 140 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 LRRC69Q6ZNQ3 347 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 ZNF804AQ7Z570 1209 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 RASAL3Q86YV0 1011 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 BTBD6Q96KE9 485 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 DBNDD2Q9BQY9 259 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 TSPAN10Q9H1Z9 355 aaPredicted RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 R3HDMLQ9H3Y0 253 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 MARK1Q9P0L2 795 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 DBNLQ9UJU6 430 aaKnown RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 RCAN3Q9UKA8 241 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 ABT1Q9ULW3 272 aaKnown RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 TTF2Q9UNY4 1162 aaKnown RBP7.81□□□□□ -1.16
LDHC-209ENST00000545848 MYH8P13535 1937 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 LOC285556D6RIA3 1793 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 MGAMO43451 1857 aa7.81□□□□□ -1.16
LDHC-209ENST00000545848 PARP14Q460N5 1801 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 PALM3A6NDB9 673 aaPredicted RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 MSTNO14793 375 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 GNAI2P04899 355 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 HSPA8P11142 646 aaKnown RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 CRKP46108 304 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 ATP8B2P98198 1209 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 MVPQ14764 893 aaKnown RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 CDC37L1Q7L3B6 337 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 FCHSD1Q86WN1 690 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 HOMEZQ8IX15 550 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 SIX5Q8N196 739 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 EAF2Q96CJ1 260 aaPredicted RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 EDC3Q96F86 508 aaKnown RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 TMEM39BQ9GZU3 492 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 GBA2Q9HCG7 927 aaPredicted RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 DDX4Q9NQI0 724 aaKnown RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 ZBTB40Q9NUA8 1239 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 ZNF70Q9UC06 446 aaPredicted RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 KLF15Q9UIH9 416 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 DAGLAQ9Y4D2 1042 aa7.8□□□□□ -1.16
LDHC-209ENST00000545848 GPC6Q9Y625 555 aaPredicted RBP7.8□□□□□ -1.16
LDHC-209ENST00000545848 PITPNM2Q9BZ72 1349 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 TCP10L2B9ZVM9 353 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 SMIM22K7EJ46 135 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 M0R2N6 131 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 COL8A1P27658 744 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 DGKGP49619 791 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 HUNKP57058 714 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 PCBP4P57723 403 aaKnown RBP7.79□□□□□ -1.16
LDHC-209ENST00000545848 PSMA6P60900 246 aaKnown RBP7.79□□□□□ -1.16
LDHC-209ENST00000545848 LAMC2Q13753 1193 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 DEFB115Q30KQ5 88 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 ZNF468Q5VIY5 522 aaPredicted RBP7.79□□□□□ -1.16
LDHC-209ENST00000545848 CHSY3Q70JA7 882 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 TSEN2Q8NCE0 465 aaKnown RBP7.79□□□□□ -1.16
LDHC-209ENST00000545848 RHPN1Q8TCX5 695 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 LPIN2Q92539 896 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 SPOCK3Q9BQ16 436 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 ANTXR1Q9H6X2 564 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 NEUROD4Q9HD90 331 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 PIH1D3Q9NQM4 214 aaKnown RBP7.79□□□□□ -1.16
LDHC-209ENST00000545848 HMG20BQ9P0W2 317 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 PRR12Q9ULL5 1215 aa7.79□□□□□ -1.16
LDHC-209ENST00000545848 PLXNB2O15031 1838 aa7.78□□□□□ -1.16
LDHC-209ENST00000545848 KRBA1A5PL33 1030 aa7.78□□□□□ -1.16
LDHC-209ENST00000545848 PIK3R2O00459 728 aa7.78□□□□□ -1.16
LDHC-209ENST00000545848 GNB5O14775 395 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms